Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 BTBD10P2-201ENST00000404779 676 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AL160275.2-201ENST00000412010 394 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC069213.2-201ENST00000420238 366 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 RAD23BP1-201ENST00000421404 1227 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AL606495.1-201ENST00000422100 813 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AP001324.1-201ENST00000428553 399 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 OR51AB1P-201ENST00000429046 620 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 MTND1P33-201ENST00000446251 917 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.39□□□□□ -1.71
HNF4AP41235 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 AL121877.1-201ENST00000453704 622 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 SBDSP1-204ENST00000453858 737 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 HMGB3P30-201ENST00000457863 606 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC015724.1-201ENST00000478577 156 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 MTCO2P9-201ENST00000503214 694 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC093755.1-201ENST00000512950 1023 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 MYL12AP1-201ENST00000518490 515 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC090151.1-201ENST00000520784 730 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC068339.2-201ENST00000534395 618 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AP006289.1-201ENST00000538089 277 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC007424.1-203ENST00000554613 687 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 VN1R88P-201ENST00000596787 292 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC245884.10-201ENST00000597355 337 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 BPIFA4P-203ENST00000603168 689 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
HNF4AP41235 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 AF129408.1-201ENST00000608767 431 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC016597.2-201ENST00000613256 341 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC121761.2-201ENST00000617300 689 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC022960.3-201ENST00000619794 441 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AL138955.1-201ENST00000622881 1040 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AP000943.4-201ENST00000622912 357 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.39□□□□□ -1.71
HNF4AP41235 AL109659.3-201ENST00000624985 950 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 AC107081.3-201ENST00000612715 2034 ntBASIC4.39□□□□□ -1.71
HNF4AP41235 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HNF4AP41235 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.39□□□□□ -1.71
HNF4AP41235 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
HNF4AP41235 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 KPNA2P2-201ENST00000419546 1489 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC016716.1-201ENST00000265882 708 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC021146.4-201ENST00000309229 279 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HNF4AP41235 RNA5SP502-201ENST00000362694 119 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 CYB5AP4-201ENST00000396692 399 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 ATP5F1P6-201ENST00000402768 767 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AL049697.2-201ENST00000403708 294 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 RNU6-272P-201ENST00000411028 104 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 UBE2V1P1-201ENST00000430836 445 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AL513175.1-201ENST00000431492 780 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 MTCO1P43-201ENST00000431831 488 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC069285.2-201ENST00000440210 275 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 Z77249.1-201ENST00000444622 1175 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 ARL2BPP10-201ENST00000446487 531 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC073264.2-201ENST00000448886 166 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 BX248409.1-201ENST00000455497 255 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 AP000873.1-201ENST00000463987 400 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HNF4AP41235 HPRT1P2-201ENST00000505250 544 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC093720.1-201ENST00000505681 714 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 VWA8P1-201ENST00000510889 176 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 SCARNA1-201ENST00000517138 166 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 RNU4-60P-201ENST00000517239 135 ntBASIC4.38□□□□□ -1.71
HNF4AP41235 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.38□□□□□ -1.71
HNF4AP41235 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.38□□□□□ -1.71
HNF4AP41235 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms