Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC103881.1-201ENST00000603476 538 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AL390208.1-201ENST00000605885 644 ntBASIC6.8□□□□□ -1.32
RXRBP28702 MIR7844-201ENST00000616161 122 ntBASIC6.8□□□□□ -1.32
RXRBP28702 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 AL136981.2-201ENST00000617319 734 ntBASIC6.8□□□□□ -1.32
RXRBP28702 MIR6075-201ENST00000620782 95 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AC022509.4-201ENST00000621404 572 ntBASIC6.8□□□□□ -1.32
RXRBP28702 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.8□□□□□ -1.32
RXRBP28702 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 RN7SKP280-201ENST00000364196 304 ntBASIC6.79□□□□□ -1.32
RXRBP28702 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 Y_RNA.535-201ENST00000384612 99 ntBASIC6.79□□□□□ -1.32
RXRBP28702 DBIP1-201ENST00000401435 260 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AL356968.2-201ENST00000412769 1257 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 ATP5HP2-201ENST00000433885 485 ntBASIC6.79□□□□□ -1.32
RXRBP28702 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 ARL5AP2-201ENST00000444698 533 ntBASIC6.79□□□□□ -1.32
RXRBP28702 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 AP000852.1-201ENST00000472460 573 ntBASIC6.79□□□□□ -1.32
RXRBP28702 WBP1LP4-201ENST00000505043 344 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 OR8A2P-201ENST00000528631 952 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AP001781.1-201ENST00000530977 207 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.79□□□□□ -1.32
RXRBP28702 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.79□□□□□ -1.32
RXRBP28702 AC020910.3-201ENST00000603701 874 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AL354760.1-201ENST00000608357 643 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AL136221.1-201ENST00000621449 509 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AC005858.4-201ENST00000623191 700 ntBASIC6.79□□□□□ -1.32
RXRBP28702 AC025048.6-202ENST00000627667 438 ntBASIC6.79□□□□□ -1.32
RXRBP28702 MIR3688-2-201ENST00000636963 87 ntBASIC6.79□□□□□ -1.32
RXRBP28702 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 AL034549.2-201ENST00000618285 3373 ntBASIC6.79□□□□□ -1.32
RXRBP28702 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 MTND4P12-201ENST00000498999 1377 ntBASIC6.79□□□□□ -1.32
RXRBP28702 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RXRBP28702 AL591135.1-201ENST00000401578 5914 ntBASIC6.79□□□□□ -1.32
RXRBP28702 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.79□□□□□ -1.32
RXRBP28702 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC6.79□□□□□ -1.32
RXRBP28702 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 AC099654.2-201ENST00000433031 1980 ntBASIC6.78□□□□□ -1.32
RXRBP28702 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.78□□□□□ -1.32
RXRBP28702 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 OR10J6P-201ENST00000289731 930 ntBASIC6.78□□□□□ -1.32
RXRBP28702 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 SNORD113.2-201ENST00000364166 89 ntBASIC6.78□□□□□ -1.32
RXRBP28702 RNA5SP509-201ENST00000364577 119 ntBASIC6.78□□□□□ -1.32
RXRBP28702 RNU4-12P-201ENST00000365233 139 ntBASIC6.78□□□□□ -1.32
RXRBP28702 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RXRBP28702 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RXRBP28702 AC093719.1-202ENST00000392735 373 ntBASIC6.78□□□□□ -1.32
RXRBP28702 RPL23AP59-201ENST00000399415 461 ntBASIC6.78□□□□□ -1.32
RXRBP28702 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 RNGTTP1-201ENST00000420965 728 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.78□□□□□ -1.32
RXRBP28702 GLRXP1-201ENST00000423261 334 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 MTND1P28-201ENST00000435623 950 ntBASIC6.78□□□□□ -1.32
RXRBP28702 MTND5P14-201ENST00000441481 1267 ntBASIC6.78□□□□□ -1.32
RXRBP28702 OR7E125P-201ENST00000443450 846 ntBASIC6.78□□□□□ -1.32
RXRBP28702 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.78□□□□□ -1.32
RXRBP28702 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.78□□□□□ -1.32
RXRBP28702 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.78□□□□□ -1.32
RXRBP28702 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.78□□□□□ -1.32
RXRBP28702 AC108941.1-201ENST00000502853 530 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC006499.5-201ENST00000505037 514 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.78□□□□□ -1.32
RXRBP28702 RNU6-1153P-201ENST00000516760 105 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC023632.4-201ENST00000517783 191 ntBASIC6.78□□□□□ -1.32
RXRBP28702 OR5M2P-201ENST00000529003 936 ntBASIC6.78□□□□□ -1.32
RXRBP28702 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC6.78□□□□□ -1.32
RXRBP28702 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.78□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms