Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC073137.1-201ENST00000605636 634 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 RMST_10.1-201ENST00000616309 154 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 AC092192.1-201ENST00000633154 1018 ntBASIC5.29□□□□□ -1.56
POLR2AP24928 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
POLR2AP24928 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
POLR2AP24928 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
POLR2AP24928 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 RNA5SP119-201ENST00000362715 117 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 OR5H15-201ENST00000383696 930 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.28□□□□□ -1.56
POLR2AP24928 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.28□□□□□ -1.56
POLR2AP24928 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.28□□□□□ -1.56
POLR2AP24928 AL133547.1-201ENST00000448546 220 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AL096803.2-201ENST00000450032 677 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AC097262.1-201ENST00000452559 548 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AL109741.2-201ENST00000455561 343 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AL133477.1-201ENST00000457472 514 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 RPS27AP17-201ENST00000463344 455 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.28□□□□□ -1.56
POLR2AP24928 RNA5SP49-201ENST00000516450 115 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 MIR2116-201ENST00000517221 80 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.28□□□□□ -1.56
POLR2AP24928 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.28□□□□□ -1.56
POLR2AP24928 HNRNPCP4-201ENST00000571636 900 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 AC090616.2-202ENST00000584248 222 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.28□□□□□ -1.56
POLR2AP24928 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.28□□□□□ -1.56
POLR2AP24928 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
POLR2AP24928 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
POLR2AP24928 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.28□□□□□ -1.56
POLR2AP24928 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
POLR2AP24928 NACA3P-201ENST00000359690 648 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AL354941.1-201ENST00000438600 464 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 PTMAP3-201ENST00000447474 330 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 AC105918.1-201ENST00000474399 838 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.27□□□□□ -1.57
POLR2AP24928 OR5H4P-201ENST00000510851 923 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 TRMT10BP1-201ENST00000519377 943 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.27□□□□□ -1.57
POLR2AP24928 NOP56P3-201ENST00000549457 385 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 AC015912.2-201ENST00000571053 181 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 AC078795.2-201ENST00000602835 1252 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AL136363.2-201ENST00000604173 851 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AL008636.1-201ENST00000625038 1018 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
POLR2AP24928 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
POLR2AP24928 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
POLR2AP24928 MTND1P23-201ENST00000416931 372 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC5.27□□□□□ -1.57
POLR2AP24928 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.27□□□□□ -1.57
POLR2AP24928 MTND5P24-201ENST00000438892 1767 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 ARAFP2-201ENST00000440565 559 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC118469.1-201ENST00000442943 488 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 RPL23AP2-201ENST00000471227 466 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC022336.1-201ENST00000475510 337 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC079203.1-201ENST00000487972 404 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
POLR2AP24928 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
POLR2AP24928 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 AC005868.1-201ENST00000536421 331 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.27□□□□□ -1.57
POLR2AP24928 SNX18P3-202ENST00000565670 1750 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.27□□□□□ -1.57
POLR2AP24928 AF250324.2-201ENST00000608299 610 ntBASIC5.27□□□□□ -1.57
POLR2AP24928 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms