Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 RNU1-150P-201ENST00000362491 162 ntBASIC6.45□□□□□ -1.38
LIG1P18858 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LIG1P18858 RNA5SP498-201ENST00000411342 120 ntBASIC6.45□□□□□ -1.38
LIG1P18858 GPS2P1-201ENST00000411761 986 ntBASIC6.45□□□□□ -1.38
LIG1P18858 OR51A3P-201ENST00000413596 924 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.45□□□□□ -1.38
LIG1P18858 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC6.45□□□□□ -1.38
LIG1P18858 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC6.45□□□□□ -1.38
LIG1P18858 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 AP000936.3-201ENST00000438127 255 ntBASIC6.45□□□□□ -1.38
LIG1P18858 RPL5P25-201ENST00000441148 775 ntBASIC6.45□□□□□ -1.38
LIG1P18858 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC6.45□□□□□ -1.38
LIG1P18858 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 DUTP7-201ENST00000507982 486 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.45□□□□□ -1.38
LIG1P18858 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC6.45□□□□□ -1.38
LIG1P18858 AC112191.2-201ENST00000522428 333 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 OR6C73P-201ENST00000546432 358 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.45□□□□□ -1.38
LIG1P18858 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.45□□□□□ -1.38
LIG1P18858 AC136618.2-201ENST00000575091 400 ntBASIC6.45□□□□□ -1.38
LIG1P18858 KPNA2P3-201ENST00000584190 848 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.45□□□□□ -1.38
LIG1P18858 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 AC131902.3-201ENST00000611767 581 ntBASIC6.45□□□□□ -1.38
LIG1P18858 AL356274.1-201ENST00000617064 410 ntBASIC6.45□□□□□ -1.38
LIG1P18858 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LIG1P18858 OR4F13P-202ENST00000560066 2054 ntBASIC6.45□□□□□ -1.38
LIG1P18858 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
LIG1P18858 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.44□□□□□ -1.38
LIG1P18858 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIG1P18858 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 BRAFP1-201ENST00000445336 2703 ntBASIC6.44□□□□□ -1.38
LIG1P18858 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.44□□□□□ -1.38
LIG1P18858 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIG1P18858 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.44□□□□□ -1.38
LIG1P18858 OR9K1P-202ENST00000641111 3217 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RNU6-666P-201ENST00000363499 107 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RNU5E-5P-201ENST00000365379 116 ntBASIC6.44□□□□□ -1.38
LIG1P18858 Y_RNA.402-201ENST00000383972 102 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RNA5SP284-201ENST00000384547 118 ntBASIC6.44□□□□□ -1.38
LIG1P18858 Y_RNA.535-201ENST00000384612 99 ntBASIC6.44□□□□□ -1.38
LIG1P18858 MT-TD-201ENST00000387419 68 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC6.44□□□□□ -1.38
LIG1P18858 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.44□□□□□ -1.38
LIG1P18858 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AC007559.1-201ENST00000428736 355 ntBASIC6.44□□□□□ -1.38
LIG1P18858 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 DNAJB5P1-201ENST00000454004 806 ntBASIC6.44□□□□□ -1.38
LIG1P18858 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC6.44□□□□□ -1.38
LIG1P18858 SETP20-201ENST00000457046 852 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RPS23P2-201ENST00000463671 415 ntBASIC6.44□□□□□ -1.38
LIG1P18858 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LIG1P18858 AC007998.1-201ENST00000474156 672 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AC104687.1-201ENST00000485829 412 ntBASIC6.44□□□□□ -1.38
LIG1P18858 HMGN2P25-201ENST00000486956 268 ntBASIC6.44□□□□□ -1.38
LIG1P18858 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.44□□□□□ -1.38
LIG1P18858 AC108078.3-201ENST00000502633 489 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AC111193.1-201ENST00000504097 155 ntBASIC6.44□□□□□ -1.38
LIG1P18858 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 IGLV3-24-201ENST00000517477 197 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AP002748.2-201ENST00000528671 348 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AC122688.1-201ENST00000541494 223 ntBASIC6.44□□□□□ -1.38
LIG1P18858 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC6.44□□□□□ -1.38
LIG1P18858 HSPE1P2-201ENST00000554777 306 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC6.44□□□□□ -1.38
LIG1P18858 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.44□□□□□ -1.38
LIG1P18858 MIR3913-1-201ENST00000577744 102 ntBASIC6.44□□□□□ -1.38
LIG1P18858 MIR3614-201ENST00000581261 86 ntBASIC6.44□□□□□ -1.38
LIG1P18858 AL596327.1-201ENST00000603629 213 ntBASIC6.44□□□□□ -1.38
LIG1P18858 TAS2R6P-201ENST00000605022 826 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RNU6-88P-201ENST00000606801 100 ntBASIC6.44□□□□□ -1.38
LIG1P18858 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LIG1P18858 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms