Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 CDY3P-201ENST00000454543 1618 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
PTPRFP10586 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 MIR448-201ENST00000362131 111 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 RNU6-249P-201ENST00000363016 102 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 RNA5SP50-201ENST00000363731 107 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 MIR634-201ENST00000385208 97 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPRFP10586 AC005326.1-201ENST00000429197 123 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPRFP10586 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 HMGB3P13-201ENST00000511263 607 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.21□□□□□ -1.74
PTPRFP10586 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 U4.6-201ENST00000621618 127 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.21□□□□□ -1.74
PTPRFP10586 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PTPRFP10586 USP8P1-201ENST00000494673 3183 ntBASIC4.21□□□□□ -1.74
PTPRFP10586 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRFP10586 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRFP10586 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRFP10586 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRFP10586 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
PTPRFP10586 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRFP10586 IPO8P1-201ENST00000455509 3109 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 RNA5SP424-201ENST00000390988 115 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 RNA5SP120-201ENST00000410900 112 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 RN7SKP53-201ENST00000411337 315 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 AC017079.2-201ENST00000416102 485 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 HSFY1P1-201ENST00000423928 1178 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
PTPRFP10586 VN1R25P-201ENST00000443385 738 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 AL591363.1-201ENST00000450091 483 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.2□□□□□ -1.74
PTPRFP10586 SEPT7P3-201ENST00000455017 621 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 VN1R40P-201ENST00000455196 941 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 IGHV3-32-201ENST00000519182 355 ntBASIC4.2□□□□□ -1.74
PTPRFP10586 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.2□□□□□ -1.74
PTPRFP10586 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
PTPRFP10586 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
PTPRFP10586 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 GCNT6-201ENST00000379591 934 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 MIR128-1-201ENST00000384921 82 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AL391219.1-201ENST00000422570 483 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPRFP10586 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPRFP10586 RBMY2UP-201ENST00000453474 324 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AC133473.1-201ENST00000455173 299 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 BTF3P5-201ENST00000457252 467 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTPRFP10586 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.19□□□□□ -1.74
PTPRFP10586 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC090877.1-201ENST00000561418 344 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC079880.2-201ENST00000603790 1213 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 MIR4727-201ENST00000622232 55 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 AL022322.2-201ENST00000624072 20397 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
PTPRFP10586 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
PTPRFP10586 CBX1P3-201ENST00000413296 527 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 OSTCP5-201ENST00000425293 453 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 SNORD105B-201ENST00000458770 79 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 RPS6P4-201ENST00000494693 758 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.19□□□□□ -1.74
PTPRFP10586 AC125494.3-201ENST00000602759 455 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AC069209.1-201ENST00000619282 651 ntBASIC4.19□□□□□ -1.74
PTPRFP10586 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.19□□□□□ -1.74
PTPRFP10586 AL035425.3-201ENST00000564206 4996 ntBASIC4.18□□□□□ -1.74
PTPRFP10586 NAMPTP1-201ENST00000440465 2514 ntBASIC4.18□□□□□ -1.74
PTPRFP10586 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
PTPRFP10586 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
PTPRFP10586 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRFP10586 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.18□□□□□ -1.74
PTPRFP10586 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.18□□□□□ -1.74
PTPRFP10586 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms