Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 RSL24D1P4-201ENST00000400938 484 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 RPF2P1-201ENST00000424137 906 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AC108941.1-201ENST00000502853 530 ntBASIC1.61□□□□□ -2.15
USH2AO75445 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC1.61□□□□□ -2.15
USH2AO75445 AC098826.3-201ENST00000603823 466 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL360085.1-201ENST00000604713 532 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL451044.1-201ENST00000604867 238 ntBASIC1.61□□□□□ -2.15
USH2AO75445 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 PRICKLE2-205ENST00000638394 9956 ntAPPRIS P2 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 AC125336.1-201ENST00000508893 2827 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AL356274.2-201ENST00000624379 3752 ntBASIC1.61□□□□□ -2.15
USH2AO75445 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 AL031679.1-201ENST00000400616 525 ntBASIC1.61□□□□□ -2.15
USH2AO75445 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 RPS4XP13-201ENST00000483219 789 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC090013.1-201ENST00000485147 480 ntBASIC1.61□□□□□ -2.15
USH2AO75445 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 EEF1A1P37-201ENST00000522748 715 ntBASIC1.61□□□□□ -2.15
USH2AO75445 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.61□□□□□ -2.15
USH2AO75445 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AL731532.2-201ENST00000623542 1953 ntBASIC1.61□□□□□ -2.15
USH2AO75445 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 BX119904.3-201ENST00000428194 957 ntBASIC1.61□□□□□ -2.15
USH2AO75445 SETD6P1-201ENST00000444575 317 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC1.61□□□□□ -2.15
USH2AO75445 Y_RNA.670-201ENST00000516255 105 ntBASIC1.61□□□□□ -2.15
USH2AO75445 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.61□□□□□ -2.15
USH2AO75445 AC092868.3-201ENST00000560515 784 ntBASIC1.61□□□□□ -2.15
USH2AO75445 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC1.61□□□□□ -2.15
USH2AO75445 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC1.61□□□□□ -2.15
USH2AO75445 CCDC162P-202ENST00000368966 6751 ntBASIC1.61□□□□□ -2.15
USH2AO75445 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
USH2AO75445 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AP002512.4-202ENST00000641599 4530 ntBASIC1.6□□□□□ -2.15
USH2AO75445 RNU4-35P-201ENST00000362588 141 ntBASIC1.6□□□□□ -2.15
USH2AO75445 Y_RNA.355-201ENST00000365462 98 ntBASIC1.6□□□□□ -2.15
USH2AO75445 OR1AA1P-201ENST00000419597 916 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 CBX1P4-201ENST00000439415 457 ntBASIC1.6□□□□□ -2.15
USH2AO75445 RPS27AP15-201ENST00000447672 466 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 PSMC1P13-201ENST00000458195 985 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 RNA5SP356-201ENST00000515972 94 ntBASIC1.6□□□□□ -2.15
USH2AO75445 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
USH2AO75445 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.6□□□□□ -2.15
USH2AO75445 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC1.6□□□□□ -2.15
USH2AO75445 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC1.6□□□□□ -2.15
USH2AO75445 AL139089.1-201ENST00000620372 975 ntBASIC1.6□□□□□ -2.15
USH2AO75445 AC139713.2-210ENST00000641741 992 ntBASIC1.6□□□□□ -2.15
USH2AO75445 FAM35DP-201ENST00000323387 2712 ntBASIC1.6□□□□□ -2.15
USH2AO75445 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
USH2AO75445 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
USH2AO75445 AP003122.5-201ENST00000527668 3766 ntBASIC1.6□□□□□ -2.15
USH2AO75445 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms