Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AP001880.2-201ENST00000538233 448 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC008083.2-201ENST00000546707 476 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC002400.1-201ENST00000569310 726 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MIR548Y-201ENST00000582739 110 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC008745.1-201ENST00000604064 271 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AL592148.2-201ENST00000612210 372 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC131238.1-201ENST00000617135 328 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC015871.5-202ENST00000623252 701 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AP000648.2-201ENST00000624182 404 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 AC027290.2-201ENST00000623210 18662 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 MTCO1P6-201ENST00000481192 1384 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 OR14L1P-202ENST00000641545 3009 ntBASIC5.26□□□□□ -1.57
SSX2IPQ9Y2D8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC021755.1-201ENST00000559747 1447 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL672167.1-204ENST00000641875 3017 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 RNA5SP191-201ENST00000362585 102 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 snoZ40.1-201ENST00000364540 72 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 RNA5SP505-201ENST00000364748 108 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SNORA62-201ENST00000365493 153 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SNORD116-9-201ENST00000384000 95 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SNORD116-3-201ENST00000384287 95 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SNORD116-7-201ENST00000384404 95 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 SNORD116-5-201ENST00000384462 95 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL035079.1-201ENST00000405210 287 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC016907.1-201ENST00000419483 435 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 USP9YP26-201ENST00000421008 661 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 COX6CP17-201ENST00000421389 185 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC009480.2-201ENST00000422916 432 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC073143.1-201ENST00000436316 395 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 RPL21P133-201ENST00000443666 476 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 HMGB1P4-201ENST00000455362 567 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 RPS3AP43-201ENST00000479743 781 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC093267.1-201ENST00000489176 961 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC084024.2-201ENST00000503480 791 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC113430.1-201ENST00000506872 718 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 OR5H4P-201ENST00000510851 923 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 MTND4LP31-201ENST00000514859 294 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AF186190.1-201ENST00000517470 480 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC012339.2-201ENST00000523996 453 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC090888.1-201ENST00000561335 1141 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL049794.2-201ENST00000616301 365 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL356274.1-201ENST00000617064 410 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AL731566.2-201ENST00000618971 317 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC145207.9-201ENST00000623802 325 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC021106.3-201ENST00000623925 531 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC087821.2-201ENST00000637086 450 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 U6.107-201ENST00000637108 79 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 MFSD8-245ENST00000641743 948 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 AC100871.1-201ENST00000507871 1456 ntBASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
SSX2IPQ9Y2D8 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SSX2IPQ9Y2D8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms