Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.63□□□□□ -1.67
SIX4Q9UIU6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC104118.1-201ENST00000607625 1589 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNU1-14P-201ENST00000362759 152 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNU4-7P-201ENST00000364758 141 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MIR142-201ENST00000384835 87 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNU6-932P-201ENST00000391108 106 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MCTS2P-201ENST00000394552 546 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNA5SP36-201ENST00000410197 133 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RN7SKP97-201ENST00000410966 333 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CEACAMP8-201ENST00000413902 580 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MTCO3P4-201ENST00000419236 787 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 COX6CP17-201ENST00000421389 185 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 NIPA2P1-201ENST00000426223 976 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 FO393419.3-201ENST00000428741 282 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 ETF1P3-201ENST00000430422 1160 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL450263.2-201ENST00000439400 589 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL512326.1-201ENST00000443050 721 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 HSFY3P-201ENST00000444242 1191 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC097499.1-201ENST00000444277 208 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC010618.1-201ENST00000469924 477 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RN7SL809P-201ENST00000482040 297 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC104164.2-201ENST00000496953 495 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNA5SP519-201ENST00000516480 119 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 RNU6-1028P-201ENST00000517164 93 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AL109766.1-201ENST00000555080 552 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MIR3939-201ENST00000582614 106 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC008759.1-201ENST00000589783 983 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 GAS5-AS1-201ENST00000602767 694 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 Z99129.2-201ENST00000619967 314 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC011330.2-201ENST00000621680 635 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC120349.3-201ENST00000624377 529 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MIR3653-201ENST00000625572 110 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CU459211.1-201ENST00000635667 749 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MIR6830-201ENST00000636015 70 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC139713.2-210ENST00000641741 992 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 MTCO1P18-201ENST00000455518 1419 ntBASIC4.62□□□□□ -1.67
SIX4Q9UIU6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SIX4Q9UIU6 AC105074.1-201ENST00000623380 3095 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 HMGB1P13-201ENST00000406019 642 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 LIPT1P1-201ENST00000415870 1186 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 UBTFL3-201ENST00000418934 1024 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 TMX2P1-201ENST00000436507 708 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 Z77249.1-201ENST00000444622 1175 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 MTATP6P26-201ENST00000445926 662 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 ABCF2P2-201ENST00000450549 296 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC009963.2-201ENST00000453431 138 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AP000942.1-201ENST00000463969 747 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 RPL6P9-201ENST00000466502 859 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 UBTFL6-201ENST00000477929 1024 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.61□□□□□ -1.67
SIX4Q9UIU6 AC108475.1-201ENST00000507880 950 ntBASIC4.61□□□□□ -1.67
SIX4Q9UIU6 PGBD4P4-201ENST00000509673 613 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms