Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MRPS35P3-201ENST00000603189 709 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AC010591.1-201ENST00000603941 649 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 MIR6852-201ENST00000621699 66 ntBASIC4.68□□□□□ -1.66
SCN11AQ9UI33 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SCN11AQ9UI33 AL365440.1-201ENST00000436135 2167 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC027290.2-201ENST00000623210 18662 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AL590609.2-201ENST00000421430 368 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 CYCSP35-201ENST00000451978 304 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AL133457.1-201ENST00000564251 987 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 KLKP1-201ENST00000595979 403 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.67□□□□□ -1.66
SCN11AQ9UI33 AC009229.4-201ENST00000623854 1947 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 Z82217.1-201ENST00000625157 8149 ntBASIC4.67□□□□□ -1.66
SCN11AQ9UI33 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AL691447.1-201ENST00000419456 387 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AL591363.1-201ENST00000450091 483 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 RPL21P6-201ENST00000479171 504 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 RN7SKP57-201ENST00000517248 293 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 MIR5186-201ENST00000577504 120 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 AC093849.1-201ENST00000563631 2209 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.66□□□□□ -1.66
SCN11AQ9UI33 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.66□□□□□ -1.66
SCN11AQ9UI33 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 Y_RNA.500-201ENST00000384466 111 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 U3.39-201ENST00000408569 239 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 OR5AW1P-201ENST00000426334 1006 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 YWHAQP9-201ENST00000445891 512 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 TRBV12-2-201ENST00000489763 344 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 MFSD8-233ENST00000641482 4860 ntBASIC4.65□□□□□ -1.66
SCN11AQ9UI33 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.65□□□□□ -1.66
SCN11AQ9UI33 AC007685.1-201ENST00000329806 452 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 RNA5SP50-201ENST00000363731 107 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 MTND6P6-201ENST00000478031 263 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC109458.1-201ENST00000508858 316 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC010680.3-201ENST00000604215 520 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC018690.1-201ENST00000608144 626 ntBASIC4.65□□□□□ -1.67
SCN11AQ9UI33 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SCN11AQ9UI33 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 SNORA48.2-201ENST00000390926 124 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AC092809.1-201ENST00000441469 474 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AP001486.1-201ENST00000463339 476 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 RN7SKP209-201ENST00000516888 304 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AC103843.2-201ENST00000530523 682 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 AC009303.3-201ENST00000591103 736 ntBASIC4.64□□□□□ -1.67
SCN11AQ9UI33 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.64□□□□□ -1.67
SCN11AQ9UI33 CDY3P-201ENST00000454543 1618 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms