Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC025884.1-201ENST00000556034 378 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 MTND6P33-201ENST00000571794 183 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC010680.4-201ENST00000605334 543 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 OR2BH1P-201ENST00000608850 864 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 MIR6891-201ENST00000618788 93 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AL669942.2-201ENST00000620352 697 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 AC009452.1-201ENST00000640823 606 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.31□□□□□ -1.72
SPASTQ9UBP0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SPASTQ9UBP0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 Y_RNA.126-201ENST00000363382 111 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 RNU1-63P-201ENST00000383902 164 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 SNORA11-201ENST00000408789 128 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC062016.2-201ENST00000420950 676 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 FGF7P3-201ENST00000454645 303 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 RPL35P6-201ENST00000490024 372 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 ATP1B1P1-201ENST00000509767 915 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 SNORA76.2-201ENST00000517095 137 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC100770.1-201ENST00000532310 322 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC027104.1-201ENST00000563702 681 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AL121834.1-201ENST00000572284 509 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC090312.2-201ENST00000582687 378 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC008759.1-201ENST00000589783 983 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC079880.2-201ENST00000603790 1213 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC069304.3-201ENST00000603938 1084 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 STMN1P1-201ENST00000617809 440 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC091948.2-201ENST00000636510 279 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 U6.107-201ENST00000637108 79 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AL158163.1-201ENST00000603915 1649 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 AC018529.3-201ENST00000624212 2254 ntBASIC4.3□□□□□ -1.72
SPASTQ9UBP0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SPASTQ9UBP0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 DCAF13P3-201ENST00000561147 1334 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC138393.1-206ENST00000540997 1886 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 RNA5SP515-201ENST00000364570 118 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 RPS20P14-201ENST00000412545 360 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC023128.2-201ENST00000420880 1223 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC005189.1-201ENST00000431286 310 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 RPL23AP52-201ENST00000439311 478 ntBASIC4.29□□□□□ -1.72
SPASTQ9UBP0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.29□□□□□ -1.72
SPASTQ9UBP0 RPS7P7-201ENST00000463499 571 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms