Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC114878.2-201ENST00000604863 1251 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC010200.2-201ENST00000605098 235 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC023509.5-201ENST00000617434 807 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL669942.2-201ENST00000620352 697 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC015908.5-201ENST00000623289 343 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AL163152.1-201ENST00000642001 374 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 AC009229.4-201ENST00000623854 1947 ntBASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CLCF1Q9UBD9 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC019155.1-201ENST00000382242 574 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RNU6-452P-201ENST00000384406 107 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RNU6-603P-201ENST00000411403 107 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 OR8F1P-201ENST00000425243 930 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 OR5BE1P-201ENST00000425977 939 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 ARL6IP1P2-201ENST00000431356 563 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AL353597.2-202ENST00000434901 373 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RPS4XP4-201ENST00000443195 763 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC005229.2-201ENST00000456995 399 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC010469.1-201ENST00000463864 576 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RPL23AP12-201ENST00000467573 473 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RPL29P14-201ENST00000495837 428 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC025459.1-201ENST00000504072 156 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 KRT19P6-201ENST00000510983 209 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 NDUFB4P12-201ENST00000513465 390 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 MIR548Y-201ENST00000582739 110 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC090525.3-201ENST00000605601 189 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC016957.2-201ENST00000616998 848 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 MIR6875-201ENST00000617506 72 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC139769.3-201ENST00000618383 175 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC138907.10-201ENST00000623708 983 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AP005264.7-201ENST00000625003 745 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 CDRT1-208ENST00000630868 794 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 BMS1P21-201ENST00000634565 365 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 OR5BE1P-202ENST00000641168 1176 ntBASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CLCF1Q9UBD9 AC096656.1-201ENST00000623826 1364 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 PHKBP1-201ENST00000450951 1951 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 GCNT6-201ENST00000379591 934 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 UBE2V1P15-201ENST00000407776 448 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 RNU4-6P-201ENST00000410804 122 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC073464.3-201ENST00000422564 712 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AL358472.1-201ENST00000431295 329 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AC122718.1-201ENST00000439448 744 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 AL121877.1-201ENST00000453704 622 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 FAM133DP-201ENST00000464802 691 ntBASIC3.63□□□□□ -1.83
CLCF1Q9UBD9 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms