Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TDP1Q9NUW8 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 SNORA70.6-201ENST00000383934 134 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 BX323845.1-201ENST00000432417 179 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 RPL19P16-201ENST00000433839 588 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 USP9YP28-201ENST00000435142 589 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 RPS26P40-201ENST00000435209 294 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 MTCYBP39-201ENST00000437562 491 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ACTR3P2-201ENST00000439585 1257 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 IGHV5-78-201ENST00000450948 295 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 NF1P3-201ENST00000457709 450 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL024509.2-201ENST00000493462 493 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 MTND4P2-201ENST00000507767 1203 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC093281.2-201ENST00000510153 597 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 snoU109.6-201ENST00000516831 118 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 SMARCE1P4-201ENST00000523647 241 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC063949.1-201ENST00000552900 865 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 TRAV15-201ENST00000556680 249 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC012213.3-201ENST00000577199 777 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AP001521.2-201ENST00000608772 546 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC007786.3-201ENST00000615154 596 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC026585.1-201ENST00000619582 524 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL031667.3-201ENST00000620124 655 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 MIR6839-201ENST00000620425 113 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC092079.1-201ENST00000558620 1985 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.25□□□□□ -1.57
TDP1Q9NUW8 AC019072.1-201ENST00000604535 1551 ntBASIC5.25□□□□□ -1.57
TDP1Q9NUW8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 RNU6-249P-201ENST00000363016 102 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 SNORA48.4-201ENST00000391089 134 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 ATP5F1P4-201ENST00000397288 746 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 FCF1P2-201ENST00000415284 583 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 IFNNP1-201ENST00000429219 553 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AC009238.2-201ENST00000431026 355 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AL353706.1-201ENST00000436728 494 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 RPL7P11-201ENST00000437586 658 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC5.24□□□□□ -1.57
TDP1Q9NUW8 OR52J1P-201ENST00000450596 932 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 MTCO3P11-201ENST00000455103 774 ntBASIC5.24□□□□□ -1.57
TDP1Q9NUW8 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms