Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 KCTD9P2-201ENST00000512203 1013 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC100770.1-201ENST00000532310 322 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC010680.3-201ENST00000604215 520 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC135178.6-201ENST00000605314 398 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC090525.3-201ENST00000605601 189 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008966.2-201ENST00000606157 453 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AL450270.1-201ENST00000606160 391 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 AC008785.1-201ENST00000624475 456 ntBASIC4.42□□□□□ -1.7
HPS4Q9NQG7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HPS4Q9NQG7 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 MIR448-201ENST00000362131 111 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 MIR23B-201ENST00000384832 97 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AL078604.1-201ENST00000404609 466 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 RNA5SP239-201ENST00000410218 129 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 DYNLL1P7-201ENST00000429273 258 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AL356276.2-201ENST00000435919 558 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 RPL21P89-201ENST00000444021 467 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 RPL5P32-201ENST00000454085 879 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 MTND2P6-201ENST00000455337 1030 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 SYT14P1-201ENST00000481459 721 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 SETP12-201ENST00000514068 805 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC105233.3-201ENST00000531125 744 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC00557-201ENST00000563184 1279 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AGGF1P6-201ENST00000569213 976 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 MIR548Y-201ENST00000582739 110 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC008759.1-201ENST00000589783 983 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 RPL7P50-201ENST00000600588 727 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC110792.4-201ENST00000609843 298 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC015813.4-201ENST00000610469 179 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 CFTRP2-201ENST00000634304 199 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 AC091948.2-201ENST00000636510 279 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.41□□□□□ -1.7
HPS4Q9NQG7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
HPS4Q9NQG7 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
HPS4Q9NQG7 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RAD1P1-201ENST00000231383 813 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RNA5SP307-201ENST00000362863 116 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL359837.1-201ENST00000381357 287 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RNU6-452P-201ENST00000384406 107 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 RN7SKP182-201ENST00000410772 298 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 SNORA74C-2-201ENST00000411179 201 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 ARL2BPP3-201ENST00000421226 480 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC009965.2-201ENST00000425328 970 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AC069285.2-201ENST00000440210 275 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL513321.1-201ENST00000441175 761 ntBASIC4.4□□□□□ -1.71
HPS4Q9NQG7 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.4□□□□□ -1.71
HPS4Q9NQG7 AL162151.2-201ENST00000448875 158 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms