Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.17□□□□□ -1.74
LRRC40Q9H9A6 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL133412.1-201ENST00000380194 2992 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 HNRNPDP2-201ENST00000406475 478 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 RAC1P3-201ENST00000416129 580 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 MTCO1P54-201ENST00000430139 712 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 YWHAEP5-201ENST00000431545 765 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC023347.2-201ENST00000433994 462 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL353093.1-201ENST00000441292 436 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 TPTE2P3-201ENST00000441562 1189 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 UQCRHP4-201ENST00000471686 272 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC091167.1-201ENST00000492017 396 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 RN7SKP141-201ENST00000516167 338 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC067805.1-201ENST00000559344 470 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC005255.1-201ENST00000593748 216 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 IPO5P1-202ENST00000600039 287 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC025946.2-201ENST00000603398 234 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC114878.2-201ENST00000604863 1251 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AL451044.1-201ENST00000604867 238 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 AC016911.1-201ENST00000613297 452 ntBASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
LRRC40Q9H9A6 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
LRRC40Q9H9A6 LARP1BP1-201ENST00000506036 1359 ntBASIC4.15□□□□□ -1.74
LRRC40Q9H9A6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
LRRC40Q9H9A6 AC025125.1-201ENST00000624743 1922 ntBASIC4.15□□□□□ -1.74
LRRC40Q9H9A6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LRRC40Q9H9A6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 MIR142-201ENST00000384835 87 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC092647.1-201ENST00000420654 287 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 NPM1P34-201ENST00000428821 893 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 VDAC1P6-201ENST00000430062 855 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 RN7SL481P-201ENST00000477764 299 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 RN7SL271P-201ENST00000487601 295 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 RPS26P15-201ENST00000488067 348 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 HAUS1P3-201ENST00000523909 662 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 MIR5684-201ENST00000585074 65 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC128687.2-201ENST00000609657 566 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AC004825.2-201ENST00000616634 455 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 MIR8059-201ENST00000620427 81 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 ATE1-AS1-202ENST00000636460 506 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AL773545.4-201ENST00000637262 310 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 AL513478.4-201ENST00000641636 310 ntBASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LRRC40Q9H9A6 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 SNORD35B-201ENST00000363660 87 ntBASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
LRRC40Q9H9A6 RNU6-40P-201ENST00000384254 107 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms