Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 SNORD6-201ENST00000365444 73 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 RNU6-1263P-201ENST00000384601 106 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 MIR3065-201ENST00000390137 79 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AL583835.1-201ENST00000399570 407 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AL589994.1-201ENST00000404962 340 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC099336.2-201ENST00000422457 254 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 RPL6P5-201ENST00000445678 828 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 VN1R32P-201ENST00000452234 905 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC099560.2-201ENST00000457554 255 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 SEPT7P6-201ENST00000469999 1143 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC021146.1-201ENST00000511202 716 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 RNA5SP309-201ENST00000516670 106 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 TVP23BP1-201ENST00000557500 617 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC007179.3-201ENST00000604976 235 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC015922.4-201ENST00000612568 690 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC084757.4-201ENST00000616350 526 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC019278.1-201ENST00000623516 479 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 AC020978.9-201ENST00000624380 1141 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
TRIM4Q9C037 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.11□□□□□ -1.75
TRIM4Q9C037 NCAPGP1-201ENST00000505112 1814 ntBASIC4.11□□□□□ -1.75
TRIM4Q9C037 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 Z82217.1-201ENST00000625157 8149 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 AL445437.1-201ENST00000623157 3087 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 MIR449B-201ENST00000384995 97 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 RPL21P65-201ENST00000406094 466 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 RPS20P14-201ENST00000412545 360 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 RPL23AP89-201ENST00000439324 255 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC110768.1-201ENST00000509222 400 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 ATP1B1P1-201ENST00000509767 915 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC005798.1-201ENST00000513715 387 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC108064.1-201ENST00000513791 460 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 RNU6-1231P-201ENST00000517185 103 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 SNORA70.24-201ENST00000517233 118 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AP000619.3-201ENST00000535634 1127 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 MTND2P17-201ENST00000550281 688 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 AC053481.4-201ENST00000583164 216 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 BMS1P7-201ENST00000602440 1052 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.1□□□□□ -1.75
TRIM4Q9C037 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
TRIM4Q9C037 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
TRIM4Q9C037 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM4Q9C037 FAM91A3P-201ENST00000456826 2544 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 OR11H4-201ENST00000315409 1082 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AL356095.1-201ENST00000417217 199 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 AL133547.1-201ENST00000448546 220 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.09□□□□□ -1.75
TRIM4Q9C037 HMGN2P7-201ENST00000456186 273 ntBASIC4.09□□□□□ -1.75
TRIM4Q9C037 AC087385.1-201ENST00000475062 312 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms