Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AL359955.2-201ENST00000445380 353 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC108463.1-201ENST00000450258 347 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC019235.1-201ENST00000503847 207 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 HMGB1P28-201ENST00000507778 552 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 RNU6-1261P-201ENST00000517194 104 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 OR5M7P-201ENST00000526140 972 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 DUX4L52-201ENST00000549363 777 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC079600.1-201ENST00000550326 297 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 SNORD95-201ENST00000579879 68 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 BNIP3P8-201ENST00000597863 560 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL049634.3-201ENST00000604968 457 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC008536.2-201ENST00000607284 349 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC103710.1-201ENST00000610003 901 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL359535.1-201ENST00000612100 1087 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL021918.2-201ENST00000613415 194 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL512624.1-201ENST00000613638 469 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC108479.2-201ENST00000617314 601 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC136475.10-201ENST00000620253 385 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL359880.1-201ENST00000621879 266 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AL359697.1-201ENST00000624879 587 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 MIR6863-201ENST00000636112 90 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 DCAF13P1-201ENST00000495256 1330 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 ZNF37BP-203ENST00000452306 1352 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 CASC19-280ENST00000642102 1351 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 RARSP1-201ENST00000542842 1418 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC046144.1-201ENST00000478559 1853 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AC006206.1-201ENST00000544842 3387 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 AP001029.2-203ENST00000589795 4910 ntBASIC5.87□□□□□ -1.47
FOXP3Q9BZS1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 MFSD8-219ENST00000641228 2559 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AC144833.1-201ENST00000567953 4089 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 RNU6-582P-201ENST00000362989 107 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 Y_RNA.402-201ENST00000383972 102 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 MIR320B1-201ENST00000390209 79 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 RNU6-1009P-201ENST00000390996 107 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 MTCO3P40-201ENST00000392516 676 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 Y_RNA.598-201ENST00000410480 95 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 RN7SKP286-201ENST00000410894 299 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL356583.2-201ENST00000426536 280 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 TMEM183AP1-205ENST00000432739 290 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 UBE2V1P5-201ENST00000440070 405 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 NPM1P39-201ENST00000449818 867 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 FDX1P2-201ENST00000450769 375 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 YWHAEP1-201ENST00000453697 763 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 GEMIN2P1-201ENST00000454246 752 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 RN7SL177P-201ENST00000476596 299 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL035404.1-201ENST00000497982 568 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 RNU6-358P-201ENST00000516564 75 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 MIR4776-2-201ENST00000580204 80 ntBASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.86□□□□□ -1.47
FOXP3Q9BZS1 AC063977.5-201ENST00000601044 974 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms