Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM54Q9BYV2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC011477.1-204ENST00000623416 1325 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 Y_RNA.18-201ENST00000362461 102 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MIR1286-201ENST00000408112 78 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MIR1284-201ENST00000408337 120 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 CEACAMP8-201ENST00000413902 580 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MTCYBP39-201ENST00000437562 491 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 RPL35AP21-201ENST00000437667 333 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC073387.1-201ENST00000453261 709 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MTCO3P16-201ENST00000454456 754 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MTND4LP3-201ENST00000468320 276 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC091435.1-201ENST00000505442 584 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 PGAM1P13-201ENST00000507497 754 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 HMGB3P13-201ENST00000511263 607 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SOD1P3-201ENST00000518682 454 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SLC2A13P1-201ENST00000531560 322 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 BNIP3P1-201ENST00000547295 580 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC007225.2-201ENST00000562529 256 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC012435.1-202ENST00000568772 240 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MIR3915-201ENST00000578518 97 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 NF1P5-201ENST00000588287 448 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC018714.1-201ENST00000605028 208 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC135507.1-201ENST00000607214 561 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AL512329.2-201ENST00000607350 548 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC008083.4-201ENST00000615076 444 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AC015914.2-201ENST00000618167 288 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 MTND4P34-201ENST00000572715 1371 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRIM54Q9BYV2 AL022393.1-201ENST00000625142 1677 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 SNORA17.1-201ENST00000362945 126 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 RNU1-43P-201ENST00000365052 165 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 RNU6-1122P-201ENST00000384449 107 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AL031577.2-201ENST00000404133 280 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AC016769.2-201ENST00000414815 475 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 RBMY2KP-201ENST00000418221 992 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AC008280.1-201ENST00000418851 412 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 RPP40P1-201ENST00000426762 456 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AL035407.1-201ENST00000429211 571 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 MTCO2P7-201ENST00000446518 666 ntBASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM54Q9BYV2 RN7SL809P-201ENST00000482040 297 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms