Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 MIR134-201ENST00000385258 73 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 RNU4-6P-201ENST00000410804 122 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 CASKP1-201ENST00000412870 582 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 RPL36AP36-201ENST00000418616 301 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 CYP4F29P-201ENST00000420685 446 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 HSFY6P-201ENST00000445573 403 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AL354710.1-201ENST00000453641 246 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 RPL7P19-201ENST00000469948 618 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC022034.3-201ENST00000471393 478 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 TRBV12-2-201ENST00000489763 344 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 OR52A4P-203ENST00000498233 1014 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 RAC1P2-201ENST00000511164 579 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 SNORD116-26-201ENST00000516006 96 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 RNU6-352P-201ENST00000516908 107 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 IGLVIV-53-201ENST00000520107 367 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 EIF1AXP2-201ENST00000555940 413 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC000123.2-201ENST00000623124 461 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 ATE1-AS1-202ENST00000636460 506 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 CASC19-261ENST00000641853 1638 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 AC009313.2-201ENST00000417893 1941 ntBASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.58□□□□□ -1.84
RSPO3Q9BXY4 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 MIR199A2-201ENST00000385289 110 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 MT-RNR1-201ENST00000389680 954 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 RNA5SP239-201ENST00000410218 129 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 RPL7AP73-201ENST00000413490 353 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC007529.1-201ENST00000418574 2178 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC022022.1-201ENST00000430304 178 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 RPS3AP6-201ENST00000484430 795 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AP002812.1-201ENST00000495378 474 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC146944.2-203ENST00000502493 354 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC147055.1-201ENST00000509261 750 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC139495.1-202ENST00000513164 354 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC026402.1-201ENST00000513642 170 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 SNORD116-30-201ENST00000516468 85 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 SCARNA14-201ENST00000516903 136 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC027287.1-201ENST00000553115 1453 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC020914.4-201ENST00000597690 277 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC245389.1-201ENST00000605141 529 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AL591034.3-201ENST00000605511 685 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 BRDTP1-201ENST00000605735 677 ntBASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RSPO3Q9BXY4 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 NCAPGP1-201ENST00000505112 1814 ntBASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RSPO3Q9BXY4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms