Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 CTH-202ENST00000370938 1805 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RPL32P3-201ENST00000359025 275 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RNU6-169P-201ENST00000365336 107 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 SNORA20.2-201ENST00000383922 131 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RNU6-472P-201ENST00000384299 107 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AL596448.1-201ENST00000415024 392 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC245884.2-201ENST00000426257 404 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RPL21P91-201ENST00000429231 479 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 SETP5-201ENST00000437270 562 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AL590664.1-201ENST00000448065 339 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 MGAT2P1-201ENST00000449718 797 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 RNU7-66P-201ENST00000459469 62 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC022616.6-201ENST00000520479 119 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 MIR3128-201ENST00000581957 66 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 FAM25E-202ENST00000608562 189 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 VPS35P1-201ENST00000563400 1518 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ZNF652P1-201ENST00000442420 1309 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 OR11H5P-202ENST00000641612 1325 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC023245.2-201ENST00000530760 2978 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 AC008555.1-201ENST00000561778 2757 ntBASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 IL1RAP-213ENST00000447382 4769 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
COL25A1Q9BXS0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC010886.1-201ENST00000437380 2869 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC123769.2-201ENST00000624332 5984 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC024132.1-201ENST00000382007 2509 ntTSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AL136984.1-201ENST00000607611 1893 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC027088.4-201ENST00000611559 1947 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 SELENOWP1-201ENST00000322792 252 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.60-201ENST00000362831 98 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNU6-522P-201ENST00000364497 107 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 U3.12-201ENST00000364498 214 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNU6-200P-201ENST00000364743 107 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNU6-432P-201ENST00000384196 109 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.463-201ENST00000384271 102 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.785-201ENST00000384290 109 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 Y_RNA.530-201ENST00000384587 101 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNU6-310P-201ENST00000384655 107 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TMSB4XP8-201ENST00000402089 135 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RNU6-954P-201ENST00000411355 107 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TMSB4XP6-201ENST00000415187 135 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TMSB4XP1-201ENST00000424567 135 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RPL23AP30-201ENST00000432419 501 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 GPR143P-201ENST00000434155 205 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AF228730.2-201ENST00000438784 848 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC092967.1-201ENST00000449016 481 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 TRGVB-201ENST00000453257 471 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 RN7SL222P-201ENST00000476452 299 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AL161747.1-201ENST00000480068 358 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC091965.3-201ENST00000506236 208 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC097473.1-201ENST00000508142 408 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC006499.2-201ENST00000513470 337 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 OR8R1P-201ENST00000543943 764 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC6.43□□□□□ -1.38
COL25A1Q9BXS0 AC011468.4-201ENST00000603942 409 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms