Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.03□□□□□ -1.92
CSMD1Q96PZ7 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CSMD1Q96PZ7 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 DEFB109F-201ENST00000491870 277 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC006445.1-201ENST00000491925 405 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 MIR3936-201ENST00000584304 110 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC124312.4-201ENST00000605533 310 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC104623.2-202ENST00000623477 4002 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC105074.1-201ENST00000623380 3095 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 OR1AA1P-201ENST00000419597 916 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 VN1R78P-201ENST00000597393 564 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC026979.4-201ENST00000606555 645 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AC106734.1-201ENST00000568646 663 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 MIR4319-201ENST00000577285 85 ntBASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
CSMD1Q96PZ7 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 HCFC2P1-201ENST00000392864 1592 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 ZNF826P-207ENST00000622273 1910 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 RNU1-15P-201ENST00000353977 144 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 HIGD1AP4-201ENST00000430194 280 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 RPS15AP29-201ENST00000445539 400 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC026784.1-201ENST00000507986 352 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 GTF3AP2-201ENST00000557014 266 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 OR5J1P-201ENST00000313544 939 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AL109933.2-201ENST00000452651 260 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 IGKV2-26-201ENST00000518305 343 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 MIR422A-201ENST00000362286 90 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC011742.1-201ENST00000431448 434 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC091826.1-201ENST00000514065 313 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 ATP5F1P5-201ENST00000526403 760 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC063950.1-201ENST00000552036 308 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 CKS1BP3-201ENST00000600888 237 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC012603.1-201ENST00000606424 528 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC015802.5-201ENST00000607478 399 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AC116096.1-201ENST00000566804 2314 ntBASIC3.01□□□□□ -1.93
CSMD1Q96PZ7 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3□□□□□ -1.93
CSMD1Q96PZ7 AC021146.3-201ENST00000511911 260 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms