Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RNU2-6P-201ENST00000411404 190 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 CTSL3P-202ENST00000412179 788 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC009518.2-201ENST00000418056 731 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 MTCO1P54-201ENST00000430139 712 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AL451139.1-201ENST00000434718 346 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 USP9YP22-201ENST00000438971 294 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 PTMAP6-201ENST00000439110 327 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 RPL23AP56-201ENST00000460778 453 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC004453.1-201ENST00000487895 408 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-1129P-201ENST00000515964 104 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 NPM1P6-201ENST00000521088 871 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 EDDM3DP-201ENST00000554692 434 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 MTCYBP27-201ENST00000555160 670 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC090515.3-201ENST00000560431 315 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AC020910.3-201ENST00000603701 874 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 AP003399.1-201ENST00000637534 361 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 THAP12P5-201ENST00000405864 2275 ntBASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP3Q96JB5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 ASNSP1-204ENST00000641977 1664 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 RNU6-157P-201ENST00000383957 107 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 SNORD65.1-201ENST00000390889 71 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL645927.1-201ENST00000396783 406 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL645733.1-201ENST00000402250 217 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 EIF4A1P3-201ENST00000411521 244 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC234782.4-201ENST00000417646 1048 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 PAICSP7-201ENST00000419829 962 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 MFSD13B-201ENST00000420133 1290 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 PTP4A1P5-201ENST00000420305 455 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 RGS17P1-201ENST00000423358 553 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 MTND1P32-201ENST00000433043 938 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 EEF1A1P1-201ENST00000447052 739 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC108734.3-201ENST00000481241 1165 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 RN7SL558P-201ENST00000497468 299 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC116353.3-201ENST00000511215 249 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC110775.1-201ENST00000513721 462 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC008562.1-201ENST00000521763 330 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 MTCO1P47-201ENST00000523889 1271 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC063949.1-201ENST00000552900 865 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 BNIP3P26-201ENST00000600827 554 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL121932.1-201ENST00000605542 214 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC018638.7-201ENST00000605836 1114 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL450489.1-201ENST00000612071 468 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL022401.1-201ENST00000619498 108 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC083843.3-201ENST00000623679 2186 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CR381572.2-201ENST00000624852 397 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CDRT1-208ENST00000630868 794 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 MIR3974-201ENST00000637126 96 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AC092162.3-201ENST00000624511 1624 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 AL672167.1-204ENST00000641875 3017 ntBASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP3Q96JB5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CDK5RAP3Q96JB5 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms