Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RNU4-21P-201ENST00000362802 126 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
ERCC4Q92889 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AL161449.1-201ENST00000414531 1199 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC4Q92889 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 FAR2P1-206ENST00000449736 709 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC4Q92889 TRBV8-2-201ENST00000475637 270 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 NCOR1P1-202ENST00000486162 291 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AC011352.1-201ENST00000512300 793 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.74□□□□□ -1.49
ERCC4Q92889 RN7SKP31-201ENST00000516354 278 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC4Q92889 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.74□□□□□ -1.49
ERCC4Q92889 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC4Q92889 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 MIR3176-201ENST00000582210 90 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AC090181.2-201ENST00000602975 672 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 AL137072.1-201ENST00000603444 466 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AC022467.1-201ENST00000614738 749 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.74□□□□□ -1.49
ERCC4Q92889 AL136981.2-201ENST00000617319 734 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 AC008443.7-201ENST00000622195 246 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 CASC19-284ENST00000642142 1868 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
ERCC4Q92889 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
ERCC4Q92889 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.74□□□□□ -1.49
ERCC4Q92889 DCAF13P3-201ENST00000561147 1334 ntBASIC5.74□□□□□ -1.49
ERCC4Q92889 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ERCC4Q92889 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 U3.2-201ENST00000362981 210 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 RN7SKP160-201ENST00000363804 340 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 Y_RNA.311-201ENST00000365068 96 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ERCC4Q92889 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ERCC4Q92889 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC114814.2-201ENST00000419195 485 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 Z93242.1-201ENST00000427102 353 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AL161722.2-201ENST00000434731 981 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC093155.1-201ENST00000440164 826 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AL035551.1-201ENST00000446931 348 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 COX6CP18-201ENST00000448769 222 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 AL356981.1-201ENST00000454879 684 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC096741.1-201ENST00000472250 846 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 RPS4XP1-201ENST00000482189 787 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 UBA52P7-201ENST00000486088 380 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 CBX3P3-201ENST00000508108 532 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 RPS27AP18-201ENST00000515536 459 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 HMGB1P19-201ENST00000517578 577 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC012400.1-201ENST00000518452 381 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC018552.1-201ENST00000562099 811 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC011840.5-201ENST00000582125 771 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC069307.1-201ENST00000602820 447 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC112220.3-201ENST00000605502 502 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 AC005332.10-201ENST00000612725 619 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 RPSAP73-201ENST00000614820 330 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 BX005214.3-202ENST00000619809 325 ntBASIC5.73□□□□□ -1.49
ERCC4Q92889 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
ERCC4Q92889 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
ERCC4Q92889 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.73□□□□□ -1.49
ERCC4Q92889 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
ERCC4Q92889 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
ERCC4Q92889 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms