Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL358832.1-201ENST00000497800 389 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC084759.1-201ENST00000561168 290 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPL23AP87-202ENST00000573039 466 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HMGB2P1-201ENST00000591146 634 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC079587.1-201ENST00000603846 277 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AL137843.1-201ENST00000605078 385 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MESTIT1_2.1-201ENST00000616328 235 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 KPNA2P2-201ENST00000419546 1489 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HCFC2P1-201ENST00000392864 1592 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 VPS35P1-201ENST00000563400 1518 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 MIR93-201ENST00000385024 80 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 RPS29P2-201ENST00000479278 136 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 HMGB1P21-201ENST00000502313 581 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 SNORA70.24-201ENST00000517233 118 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 AC138627.1-204ENST00000641894 765 ntBASIC1.18□□□□□ -2.22
SYNE1Q8NF91 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC1.18□□□□□ -2.22
SYNE1Q8NF91 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC022417.1-201ENST00000624768 1303 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 DDX18P6-201ENST00000450119 1997 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ATP5F1P4-201ENST00000397288 746 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MIR1911-201ENST00000410783 80 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RPS26P2-201ENST00000440331 348 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 WBP1LP4-201ENST00000505043 344 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC020914.6-201ENST00000594327 272 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC006272.2-201ENST00000594725 163 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 VDAC1P9-201ENST00000412766 841 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 OR2X1P-201ENST00000421144 687 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC091286.1-201ENST00000431233 461 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC012603.1-201ENST00000606424 528 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC055839.1-201ENST00000634467 498 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MTCO1P12-201ENST00000414273 1543 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MTCO1P24-201ENST00000515438 1558 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RNA5SP97-201ENST00000365006 84 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 U1.1-201ENST00000384101 164 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC106707.2-201ENST00000484182 374 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC025627.2-201ENST00000576220 160 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC133552.5-201ENST00000604266 540 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 HSPD1P16-201ENST00000402302 394 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC097713.2-201ENST00000430199 356 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 PTMAP3-201ENST00000447474 330 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RPL26P28-201ENST00000451325 435 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 BX276092.4-201ENST00000452056 248 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC006517.1-201ENST00000480485 328 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RPS26P15-201ENST00000488067 348 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 BTG4P1-201ENST00000510421 183 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 RNU6-237P-201ENST00000515985 71 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC073530.2-201ENST00000623987 261 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC093908.1-201ENST00000623125 8092 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 SNORA48.2-201ENST00000390926 124 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC1.17□□□□□ -2.22
SYNE1Q8NF91 IGKV2D-19-201ENST00000523346 262 ntBASIC1.17□□□□□ -2.22
SYNE1Q8NF91 AC115621.1-201ENST00000604653 858 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms