Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
ZNF549Q6P9A3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.59□□□□□ -1.68
ZNF549Q6P9A3 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AL391684.1-202ENST00000641293 1636 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC092104.1-201ENST00000497346 1441 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC108751.5-201ENST00000492880 1336 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 SNORA40.2-201ENST00000390847 128 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 HMGB3P31-201ENST00000413333 595 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 BX510359.2-201ENST00000417920 305 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC027644.1-201ENST00000419595 298 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 RPL7P53-201ENST00000421245 739 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC019178.2-201ENST00000423595 505 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ELOCP8-201ENST00000439309 332 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ELOCP15-201ENST00000442090 332 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ANKRD26P4-201ENST00000455755 950 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 RPL5P13-201ENST00000462840 709 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC023050.1-201ENST00000498198 304 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC093755.1-201ENST00000512950 1023 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 RNU6-232P-201ENST00000517144 64 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 MTND1P5-201ENST00000517906 940 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 DUX4L52-201ENST00000549363 777 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AL392112.1-201ENST00000605115 829 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 AC107075.1-201ENST00000613695 314 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 LINC01808-202ENST00000641680 1116 ntBASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC4.58□□□□□ -1.68
ZNF549Q6P9A3 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 RBPJP2-201ENST00000618187 1444 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC111188.2-201ENST00000529697 1387 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL590240.1-201ENST00000334118 313 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 RNU6-157P-201ENST00000383957 107 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL355379.1-201ENST00000405542 640 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 RN7SKP267-201ENST00000410381 285 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC01881-201ENST00000416103 412 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 Z75741.2-201ENST00000417272 1167 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC007394.1-201ENST00000421941 531 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL590762.4-201ENST00000425885 253 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 OR5BE1P-201ENST00000425977 939 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 ISCUP1-201ENST00000454451 448 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC091685.2-201ENST00000454924 864 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 RPL7P32-201ENST00000457119 744 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 MTND3P5-201ENST00000512798 333 ntBASIC4.57□□□□□ -1.68
ZNF549Q6P9A3 NDUFB4P12-201ENST00000513465 390 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms