Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 TPTE2P3-201ENST00000441562 1189 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 HMGB1P21-201ENST00000502313 581 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 RPL23AP92-201ENST00000603609 255 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 TUG1_1.1-201ENST00000610654 145 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 ZNF90P1-201ENST00000480493 1951 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 AC097504.1-201ENST00000515103 2415 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 RNU4-82P-201ENST00000362443 140 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.58□□□□□ -1.84
RIF1Q5UIP0 NRBF2P5-201ENST00000603087 788 ntBASIC3.58□□□□□ -1.84
RIF1Q5UIP0 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AL672167.1-204ENST00000641875 3017 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 SNORA54-201ENST00000384281 123 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 RN7SKP97-201ENST00000410966 333 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 REREP1Y-201ENST00000422655 198 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 RPS26P4-201ENST00000431743 355 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 REREP2Y-201ENST00000439103 200 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 RPS26P2-201ENST00000440331 348 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AC008802.1-201ENST00000519121 791 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 PHBP17-201ENST00000528576 541 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AC107993.1-201ENST00000591343 684 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 IMMP1LP1-201ENST00000605170 488 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AP003485.2-201ENST00000623636 610 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
RIF1Q5UIP0 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 AC068254.2-201ENST00000623938 3577 ntBASIC3.57□□□□□ -1.84
RIF1Q5UIP0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC073335.1-201ENST00000427776 363 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 RPL21P110-201ENST00000433345 446 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC092747.2-201ENST00000545069 983 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC084759.1-201ENST00000561168 290 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 MIR7851-201ENST00000610611 160 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC124312.6-202ENST00000623624 418 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AL596275.2-208ENST00000641192 594 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 OR5H2-201ENST00000355273 945 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 PGBD4P8-201ENST00000412993 562 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC090013.1-201ENST00000485147 480 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC010149.2-201ENST00000637608 315 ntBASIC3.56□□□□□ -1.84
RIF1Q5UIP0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RIF1Q5UIP0 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 MIR199A2-201ENST00000385289 110 ntBASIC3.55□□□□□ -1.84
RIF1Q5UIP0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 AC073522.1-201ENST00000483312 377 ntBASIC3.55□□□□□ -1.84
RIF1Q5UIP0 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 AC104763.2-201ENST00000604179 382 ntBASIC3.55□□□□□ -1.84
RIF1Q5UIP0 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.55□□□□□ -1.84
RIF1Q5UIP0 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
RIF1Q5UIP0 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms