Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC022509.4-201ENST00000621404 572 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AL356863.1-201ENST00000623378 1080 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 AC067931.1-201ENST00000624190 671 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC38Q502W7 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 ECM1P2-201ENST00000503354 1577 ntBASIC5.04□□□□□ -1.6
CCDC38Q502W7 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.04□□□□□ -1.6
CCDC38Q502W7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC38Q502W7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC38Q502W7 RNU4-28P-201ENST00000364739 141 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 RNA5SP455-201ENST00000365190 119 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 SNORD96B-201ENST00000386148 79 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 RNA5SP372-201ENST00000390836 115 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 U3.36-201ENST00000408418 213 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL160275.2-201ENST00000412010 394 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 CEACAMP8-201ENST00000413902 580 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 RPL22P18-201ENST00000417197 377 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 MRPS36P1-201ENST00000421291 307 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 RGS17P1-201ENST00000423358 553 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC234779.1-201ENST00000425910 285 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 UBE2V1P1-201ENST00000430836 445 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 B3GNT2P1-201ENST00000434960 952 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 NMNAT1P2-201ENST00000435192 860 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 RHOT1P3-201ENST00000436571 331 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 MRPL48P1-201ENST00000445390 636 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 snoU13.7-201ENST00000459220 104 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC097484.1-201ENST00000471148 389 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC108734.3-201ENST00000481241 1165 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 SNRPCP2-201ENST00000504370 475 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 MTCYBP16-201ENST00000509187 1129 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 OR5H4P-201ENST00000510851 923 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC093755.1-201ENST00000512950 1023 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 OR5AN2P-201ENST00000534535 896 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 RPL21P7-201ENST00000557463 483 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC38Q502W7 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 MIR3691-201ENST00000578066 90 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 OR7E18P-201ENST00000592589 702 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL390838.2-201ENST00000602394 274 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL627230.1-201ENST00000613077 211 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 SNX18P1Y-201ENST00000616231 511 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL049794.2-201ENST00000616301 365 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL591926.8-201ENST00000616876 211 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC055839.1-201ENST00000634467 498 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC38Q502W7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CCDC38Q502W7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 MTND5P31-201ENST00000419366 1374 ntBASIC5.03□□□□□ -1.6
CCDC38Q502W7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.03□□□□□ -1.6
CCDC38Q502W7 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 RNU6-560P-201ENST00000364007 108 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 SNORD116.1-201ENST00000365628 92 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 SUGT1P1-201ENST00000379514 476 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC019155.1-201ENST00000382242 574 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 SNORA66-201ENST00000384792 133 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 RNU2-21P-201ENST00000410368 188 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 FCF1P2-201ENST00000415284 583 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 NUP35P2-201ENST00000416748 943 ntBASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.02□□□□□ -1.61
CCDC38Q502W7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms