Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC007423.1-201ENST00000605009 627 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AL049539.1-201ENST00000611964 459 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 CEP170P1-201ENST00000502249 4587 ntBASIC3.48□□□□□ -1.85
CCDC58Q4VC31 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC58Q4VC31 AP002001.2-201ENST00000529025 1469 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 RNU6-304P-201ENST00000364855 107 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 HMGB1P13-201ENST00000406019 642 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC011933.1-201ENST00000413334 321 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC017079.2-201ENST00000416102 485 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 RPL21P109-201ENST00000422213 475 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 ACTR3P2-201ENST00000439585 1257 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 RPS17P13-201ENST00000448974 407 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 Z95152.1-201ENST00000453556 656 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC116533.1-201ENST00000459748 321 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC008638.1-201ENST00000506035 866 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC111000.3-201ENST00000508057 576 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 ARL2BPP6-201ENST00000512757 439 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 IGHV3-76-201ENST00000522465 295 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC009948.4-201ENST00000604692 675 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC019193.2-201ENST00000610012 634 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 AC091905.1-201ENST00000624400 311 ntBASIC3.47□□□□□ -1.85
CCDC58Q4VC31 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC58Q4VC31 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.46□□□□□ -1.85
CCDC58Q4VC31 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.85
CCDC58Q4VC31 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 OR4K17-201ENST00000315543 1032 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 RNVU1-6-201ENST00000364688 164 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 RNA5SP366-201ENST00000365454 123 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 HSPE1P8-201ENST00000406997 288 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 HSPE1P12-201ENST00000412576 301 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 MTND4LP21-201ENST00000415303 295 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 LIPT1P1-201ENST00000415870 1186 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 SETP5-201ENST00000437270 562 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC006466.1-201ENST00000438721 289 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 MRPS31P2-201ENST00000451581 518 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 TSACC-207ENST00000470342 601 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 RN7SL860P-201ENST00000473738 223 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 NDUFB9P3-201ENST00000521269 501 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC068831.4-201ENST00000556118 109 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC106785.3-201ENST00000564064 847 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AP001180.3-201ENST00000582221 145 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 SNX6P1-201ENST00000601728 1224 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC115621.1-201ENST00000604653 858 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 BRDTP1-201ENST00000605735 677 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC099669.2-201ENST00000616549 437 ntBASIC3.46□□□□□ -1.86
CCDC58Q4VC31 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CCDC58Q4VC31 DCAF13P3-201ENST00000561147 1334 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 AC017002.4-201ENST00000604721 1525 ntBASIC3.45□□□□□ -1.86
CCDC58Q4VC31 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.45□□□□□ -1.86
CCDC58Q4VC31 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms