Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NCAPGP2-201ENST00000557911 754 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 CYCSP38-201ENST00000559840 322 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC008521.2-201ENST00000591021 259 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC015967.1-201ENST00000619893 476 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AC024884.1-201ENST00000620583 399 ntBASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC7.01□□□□□ -1.29
CTC1Q2NKJ3 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MFSD4BP1-201ENST00000513330 1552 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AL354854.1-201ENST00000455940 1363 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 Y_RNA.81-201ENST00000362997 102 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 SNORA38B-201ENST00000363524 131 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 SNORA20.1-201ENST00000364790 130 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 Y_RNA.389-201ENST00000383924 113 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 Y_RNA.645-201ENST00000391229 102 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 RPS20P2-201ENST00000402520 389 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 MRPL42P2-201ENST00000403169 426 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AL807761.1-201ENST00000417622 171 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC243428.1-201ENST00000421099 264 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 RPS17P8-201ENST00000434525 335 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC104651.2-201ENST00000447549 528 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AL590664.1-201ENST00000448065 339 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC023194.2-201ENST00000465398 406 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC092451.1-201ENST00000480211 153 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 OR4D12P-201ENST00000509361 911 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC025465.3-201ENST00000510570 311 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MTND1P19-201ENST00000511780 315 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 RNA5SP116-201ENST00000516132 98 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 RNU6-1004P-201ENST00000516584 111 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MIR3942-201ENST00000585264 109 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AF038458.1-201ENST00000588406 262 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC078899.3-201ENST00000599065 212 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 RPL26P30-202ENST00000602923 645 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC008555.7-201ENST00000605008 583 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC133104.2-201ENST00000615272 193 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 MIR8062-201ENST00000621515 85 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 CASC19-246ENST00000641625 1606 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 AP000547.3-204ENST00000588548 2523 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AC020658.2-201ENST00000559030 4020 ntBASIC7□□□□□ -1.29
CTC1Q2NKJ3 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CTC1Q2NKJ3 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7□□□□□ -1.29
CTC1Q2NKJ3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
CTC1Q2NKJ3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms