Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX1Q15475 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SIX1Q15475 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX1Q15475 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX1Q15475 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX1Q15475 AC025627.2-201ENST00000576220 160 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX1Q15475 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX1Q15475 AC006116.7-201ENST00000590141 756 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AC133794.1-201ENST00000602731 914 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AL391834.1-201ENST00000609609 560 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AC110792.4-201ENST00000609843 298 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SIX1Q15475 AL121890.3-201ENST00000618494 516 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AC022306.3-201ENST00000619930 550 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AL049777.1-201ENST00000622740 518 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AL138955.1-201ENST00000622881 1040 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 AC068880.4-201ENST00000623082 495 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.14□□□□□ -1.75
SIX1Q15475 AC124312.6-202ENST00000623624 418 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SIX1Q15475 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX1Q15475 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SIX1Q15475 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX1Q15475 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.14□□□□□ -1.75
SIX1Q15475 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SIX1Q15475 LARP1BP1-201ENST00000506036 1359 ntBASIC4.14□□□□□ -1.75
SIX1Q15475 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.14□□□□□ -1.75
SIX1Q15475 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 RNA5SP399-201ENST00000364003 117 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 HMGN2P8-201ENST00000391458 268 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 RNU4-74P-201ENST00000411280 161 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 RPL7P4-203ENST00000430239 730 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 ACTR3P2-201ENST00000439585 1257 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 MTCYBP12-201ENST00000440559 1134 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 RN7SL604P-201ENST00000492589 296 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.13□□□□□ -1.75
SIX1Q15475 AC108120.2-201ENST00000512973 294 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 PARP1P2-201ENST00000556806 195 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.13□□□□□ -1.75
SIX1Q15475 MIR4675-201ENST00000577898 77 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 RN7SL600P-201ENST00000581811 299 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC020914.4-201ENST00000597690 277 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 AC012557.1-201ENST00000607115 611 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AL135786.2-201ENST00000608422 615 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC083809.1-201ENST00000615051 472 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC114781.5-201ENST00000615297 108 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC016957.2-201ENST00000616998 848 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SIX1Q15475 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SIX1Q15475 MTND4P9-201ENST00000507819 1346 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 AC027290.2-201ENST00000623210 18662 ntBASIC4.13□□□□□ -1.75
SIX1Q15475 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SIX1Q15475 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
SIX1Q15475 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SIX1Q15475 AL606537.1-201ENST00000607258 2011 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 AC027287.1-201ENST00000553115 1453 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SIX1Q15475 AC093775.1-201ENST00000624154 1868 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SIX1Q15475 AC126755.2-208ENST00000327792 462 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AC138969.1-213ENST00000331436 462 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RNU11-4P-201ENST00000391149 133 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 FABP12P1-201ENST00000401911 322 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RNU4-25P-201ENST00000410569 230 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 RN7SKP33-201ENST00000410942 340 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.12□□□□□ -1.75
SIX1Q15475 RPL23AP26-201ENST00000412728 464 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 TPT1P2-201ENST00000413105 503 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 OR51A6P-201ENST00000418680 1004 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 MTND2P9-201ENST00000422293 931 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AL354692.1-201ENST00000423044 315 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 VN1R42P-201ENST00000424651 344 ntBASIC4.12□□□□□ -1.75
SIX1Q15475 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms