Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC099522.1-202ENST00000514718 367 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 HIGD1AP10-201ENST00000527837 282 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AL713998.2-201ENST00000604538 1198 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 ARF4P1-201ENST00000605447 541 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 AC099669.2-201ENST00000616549 437 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 XIST_intron.1-201ENST00000619444 68 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 OR5BE1P-202ENST00000641168 1176 ntBASIC3.04□□□□□ -1.92
HIST1H1AQ02539 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HIST1H1AQ02539 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC024560.2-201ENST00000507981 1497 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC005261.4-201ENST00000600047 1385 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC091152.2-201ENST00000591628 2569 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RNA5SP366-201ENST00000365454 123 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 MIR585-201ENST00000384887 94 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 U3.22-201ENST00000391120 215 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AL161909.1-201ENST00000397390 712 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 HMGB1P13-201ENST00000406019 642 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 MTHFD2P2-201ENST00000407725 247 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RN7SKP285-201ENST00000410137 318 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RPL26P29-201ENST00000415623 438 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC108032.1-201ENST00000416706 207 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 BTF3P10-201ENST00000433415 495 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RPS29P33-201ENST00000456717 146 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 UQCRHP4-201ENST00000471686 272 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RN7SL459P-201ENST00000481078 302 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC041039.1-201ENST00000485656 536 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AL035404.1-201ENST00000497982 568 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC106806.2-201ENST00000509365 500 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC026726.1-201ENST00000512859 601 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC009643.1-201ENST00000532030 391 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 CR383656.6-201ENST00000550518 394 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC022968.1-201ENST00000567372 442 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC099489.2-201ENST00000574976 260 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 VN1R81P-201ENST00000602085 372 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC114878.2-201ENST00000604863 1251 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC011944.2-201ENST00000624440 683 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 MIR7153-201ENST00000637758 57 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HIST1H1AQ02539 ZNF826P-207ENST00000622273 1910 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 UBE3AP2-201ENST00000429033 2259 ntBASIC3.03□□□□□ -1.92
HIST1H1AQ02539 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
HIST1H1AQ02539 AC073429.2-201ENST00000569694 1444 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 LARP1BP1-201ENST00000506036 1359 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 CR381670.1-201ENST00000624291 1693 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 ZNF542P-204ENST00000482727 1305 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 RNU4-39P-201ENST00000362455 127 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 HSPE1P12-201ENST00000412576 301 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
HIST1H1AQ02539 RPL7AP73-201ENST00000413490 353 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 TRGV6-201ENST00000417928 299 ntBASIC3.02□□□□□ -1.93
HIST1H1AQ02539 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms