Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL358472.1-201ENST00000431295 329 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 TBCAP1-201ENST00000436520 327 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCNA1P78396 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CCNA1P78396 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.62□□□□□ -1.67
CCNA1P78396 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.62□□□□□ -1.67
CCNA1P78396 RPL23AP12-201ENST00000467573 473 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 S100A11P1-201ENST00000477525 312 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.62□□□□□ -1.67
CCNA1P78396 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.62□□□□□ -1.67
CCNA1P78396 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.62□□□□□ -1.67
CCNA1P78396 RPL23AP87-202ENST00000573039 466 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.62□□□□□ -1.67
CCNA1P78396 VN1R84P-201ENST00000593697 235 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.62□□□□□ -1.67
CCNA1P78396 AC069200.1-201ENST00000609511 323 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 AC090246.1-201ENST00000616499 426 ntBASIC4.62□□□□□ -1.67
CCNA1P78396 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.62□□□□□ -1.67
CCNA1P78396 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.62□□□□□ -1.67
CCNA1P78396 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
CCNA1P78396 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 RNA5SP119-201ENST00000362715 117 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 RNU6-618P-201ENST00000363518 112 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 RNA5SP97-201ENST00000365006 84 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 Y_RNA.333-201ENST00000365274 102 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 RNU6-761P-201ENST00000384148 107 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 MIR195-201ENST00000385194 87 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 SNORA3.3-201ENST00000408712 125 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC073335.1-201ENST00000427776 363 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.61□□□□□ -1.67
CCNA1P78396 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 MTCYBP12-201ENST00000440559 1134 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 NDUFS5P3-201ENST00000450668 321 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 RPS11P1-201ENST00000451072 473 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 RAD23BP3-201ENST00000454157 1152 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.61□□□□□ -1.67
CCNA1P78396 KRT19P6-201ENST00000510983 209 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 ACTR6P1-201ENST00000514311 1104 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC022790.1-201ENST00000522872 204 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.61□□□□□ -1.67
CCNA1P78396 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.61□□□□□ -1.67
CCNA1P78396 RPL21P7-201ENST00000557463 483 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.61□□□□□ -1.67
CCNA1P78396 AC012417.1-201ENST00000582307 1039 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 AC015726.1-201ENST00000602353 681 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.61□□□□□ -1.67
CCNA1P78396 ABI1P1-201ENST00000603375 1120 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC114878.2-201ENST00000604863 1251 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC138473.1-201ENST00000605717 526 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC005972.3-201ENST00000606304 481 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC005344.1-201ENST00000613391 459 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC084757.4-201ENST00000616350 526 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 FP236240.3-201ENST00000623061 327 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCNA1P78396 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 NOL8P1-201ENST00000508336 3529 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AP004289.2-201ENST00000444413 1457 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AL136964.1-201ENST00000622038 2990 ntBASIC4.61□□□□□ -1.67
CCNA1P78396 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.61□□□□□ -1.67
CCNA1P78396 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CCNA1P78396 SNORA73.2-201ENST00000364946 201 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.6□□□□□ -1.67
CCNA1P78396 AL607077.1-201ENST00000401718 499 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 RN7SKP167-201ENST00000411047 285 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 NPM1P34-201ENST00000428821 893 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.6□□□□□ -1.67
CCNA1P78396 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNA1P78396 RPL7P49-201ENST00000471402 708 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNA1P78396 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNA1P78396 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
CCNA1P78396 AC034244.2-201ENST00000514668 858 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 RNU7-143P-201ENST00000516781 65 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.6□□□□□ -1.67
CCNA1P78396 AP000619.3-201ENST00000535634 1127 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.6□□□□□ -1.67
CCNA1P78396 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.6□□□□□ -1.67
CCNA1P78396 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 AC005021.1-201ENST00000608730 355 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 AC019176.2-201ENST00000611579 315 ntBASIC4.6□□□□□ -1.67
CCNA1P78396 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCNA1P78396 AC067931.1-201ENST00000624190 671 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms