Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 USP9YP14-201ENST00000430663 563 ntBASIC3.75□□□□□ -1.81
LMO4P61968 RPS24P8-201ENST00000431490 402 ntBASIC3.75□□□□□ -1.81
LMO4P61968 MTCO3P5-201ENST00000433620 714 ntBASIC3.75□□□□□ -1.81
LMO4P61968 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.75□□□□□ -1.81
LMO4P61968 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 RPL6P5-201ENST00000445678 828 ntBASIC3.75□□□□□ -1.81
LMO4P61968 RPL23AP43-201ENST00000446445 471 ntBASIC3.75□□□□□ -1.81
LMO4P61968 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 RPL7L1P1-201ENST00000448259 785 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 AC008280.2-201ENST00000455473 307 ntBASIC3.75□□□□□ -1.81
LMO4P61968 CCDC75P1-201ENST00000469247 791 ntBASIC3.75□□□□□ -1.81
LMO4P61968 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 OR8A2P-201ENST00000528631 952 ntBASIC3.75□□□□□ -1.81
LMO4P61968 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.75□□□□□ -1.81
LMO4P61968 AL359219.2-201ENST00000555184 348 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.75□□□□□ -1.81
LMO4P61968 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AC106734.1-201ENST00000568646 663 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 MIR3939-201ENST00000582614 106 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 AC061975.8-201ENST00000587058 721 ntBASIC3.75□□□□□ -1.81
LMO4P61968 VN1R84P-201ENST00000593697 235 ntBASIC3.75□□□□□ -1.81
LMO4P61968 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMO4P61968 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.75□□□□□ -1.81
LMO4P61968 AC018618.2-201ENST00000604770 446 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC010200.2-201ENST00000605098 235 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 AC245100.7-201ENST00000609678 442 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC114781.5-201ENST00000615297 108 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC009704.2-201ENST00000618739 483 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC022079.2-201ENST00000619739 566 ntBASIC3.75□□□□□ -1.81
LMO4P61968 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.75□□□□□ -1.81
LMO4P61968 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 AC090897.3-201ENST00000636973 1157 ntBASIC3.75□□□□□ -1.81
LMO4P61968 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 OR2L1P-202ENST00000641567 1023 ntBASIC3.75□□□□□ -1.81
LMO4P61968 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC3.75□□□□□ -1.81
LMO4P61968 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
LMO4P61968 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
LMO4P61968 CPHL1P-201ENST00000461341 3407 ntBASIC3.74□□□□□ -1.81
LMO4P61968 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LMO4P61968 AL031595.2-201ENST00000624215 19071 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL445437.1-201ENST00000623157 3087 ntBASIC3.74□□□□□ -1.81
LMO4P61968 MFSD8-242ENST00000641690 4199 ntBASIC3.74□□□□□ -1.81
LMO4P61968 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.74□□□□□ -1.81
LMO4P61968 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LMO4P61968 RNU1-130P-201ENST00000363930 160 ntBASIC3.74□□□□□ -1.81
LMO4P61968 RNU4-68P-201ENST00000364314 141 ntBASIC3.74□□□□□ -1.81
LMO4P61968 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AP000357.1-201ENST00000409926 1165 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AL031779.1-201ENST00000415663 330 ntBASIC3.74□□□□□ -1.81
LMO4P61968 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.74□□□□□ -1.81
LMO4P61968 AC011998.1-201ENST00000433403 117 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 NMNAT1P2-201ENST00000435192 860 ntBASIC3.74□□□□□ -1.81
LMO4P61968 RPL12P18-201ENST00000437175 325 ntBASIC3.74□□□□□ -1.81
LMO4P61968 MTND1P34-201ENST00000438556 671 ntBASIC3.74□□□□□ -1.81
LMO4P61968 NPM1P33-201ENST00000438918 872 ntBASIC3.74□□□□□ -1.81
LMO4P61968 CBX1P4-201ENST00000439415 457 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL353093.1-201ENST00000441292 436 ntBASIC3.74□□□□□ -1.81
LMO4P61968 TCEA1P3-201ENST00000443005 880 ntBASIC3.74□□□□□ -1.81
LMO4P61968 RPS27P5-201ENST00000444247 244 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 AC069540.1-201ENST00000446320 988 ntBASIC3.74□□□□□ -1.81
LMO4P61968 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LMO4P61968 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.74□□□□□ -1.81
LMO4P61968 RN7SL98P-201ENST00000462271 300 ntBASIC3.74□□□□□ -1.81
LMO4P61968 AC053481.1-201ENST00000467217 306 ntBASIC3.74□□□□□ -1.81
LMO4P61968 RAP1BP2-201ENST00000478270 544 ntBASIC3.74□□□□□ -1.81
LMO4P61968 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.74□□□□□ -1.81
LMO4P61968 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms