Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.4□□□□□ -1.71
PEX3P56589 AC023158.1-201ENST00000561632 1025 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 VN1R85P-201ENST00000601587 426 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC007423.1-201ENST00000605009 627 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC091167.4-201ENST00000605079 184 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC012603.1-201ENST00000606424 528 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.4□□□□□ -1.71
PEX3P56589 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 RMST_9.1-201ENST00000619945 193 ntBASIC4.4□□□□□ -1.71
PEX3P56589 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 FAM91A3P-201ENST00000456826 2544 ntBASIC4.4□□□□□ -1.71
PEX3P56589 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.4□□□□□ -1.71
PEX3P56589 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.4□□□□□ -1.71
PEX3P56589 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 AC087190.4-201ENST00000574616 8334 ntBASIC4.4□□□□□ -1.71
PEX3P56589 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
PEX3P56589 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.4□□□□□ -1.71
PEX3P56589 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 AL359715.4-201ENST00000606629 1436 ntBASIC4.39□□□□□ -1.71
PEX3P56589 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PEX3P56589 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
PEX3P56589 MIR93-201ENST00000385024 80 ntBASIC4.39□□□□□ -1.71
PEX3P56589 RPL23AP48-201ENST00000406913 488 ntBASIC4.39□□□□□ -1.71
PEX3P56589 MIR1251-201ENST00000408552 70 ntBASIC4.39□□□□□ -1.71
PEX3P56589 RPL23AP4-201ENST00000427757 463 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.39□□□□□ -1.71
PEX3P56589 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 AL513321.1-201ENST00000441175 761 ntBASIC4.39□□□□□ -1.71
PEX3P56589 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 VN1R25P-201ENST00000443385 738 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.39□□□□□ -1.71
PEX3P56589 AL162388.1-201ENST00000450912 352 ntBASIC4.39□□□□□ -1.71
PEX3P56589 VN1R40P-201ENST00000455196 941 ntBASIC4.39□□□□□ -1.71
PEX3P56589 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 RPL23AP73-201ENST00000492507 471 ntBASIC4.39□□□□□ -1.71
PEX3P56589 RPS6P4-201ENST00000494693 758 ntBASIC4.39□□□□□ -1.71
PEX3P56589 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.39□□□□□ -1.71
PEX3P56589 MTND1P36-201ENST00000522384 936 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AC090281.1-201ENST00000523019 276 ntBASIC4.39□□□□□ -1.71
PEX3P56589 UBTFL9-201ENST00000534504 1148 ntBASIC4.39□□□□□ -1.71
PEX3P56589 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.39□□□□□ -1.71
PEX3P56589 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.39□□□□□ -1.71
PEX3P56589 AC120057.2-201ENST00000571520 271 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AC090079.2-201ENST00000575289 768 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AL606490.9-201ENST00000603331 271 ntBASIC4.39□□□□□ -1.71
PEX3P56589 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
PEX3P56589 AC124312.6-202ENST00000623624 418 ntBASIC4.39□□□□□ -1.71
PEX3P56589 AP002967.1-201ENST00000624203 539 ntBASIC4.39□□□□□ -1.71
PEX3P56589 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.39□□□□□ -1.71
PEX3P56589 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PEX3P56589 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PEX3P56589 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PEX3P56589 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
PEX3P56589 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.38□□□□□ -1.71
PEX3P56589 SNORA3C-201ENST00000408792 125 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.38□□□□□ -1.71
PEX3P56589 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.38□□□□□ -1.71
PEX3P56589 HIGD1AP4-201ENST00000430194 280 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.38□□□□□ -1.71
PEX3P56589 AL121877.1-201ENST00000453704 622 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.38□□□□□ -1.71
PEX3P56589 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.38□□□□□ -1.71
PEX3P56589 OR9N1P-202ENST00000494289 481 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC010460.1-201ENST00000507087 466 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC027338.1-201ENST00000514840 825 ntBASIC4.38□□□□□ -1.71
PEX3P56589 RNA5SP154-201ENST00000516193 111 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.38□□□□□ -1.71
PEX3P56589 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.38□□□□□ -1.71
PEX3P56589 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.38□□□□□ -1.71
PEX3P56589 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PEX3P56589 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.38□□□□□ -1.71
PEX3P56589 YPEL5P3-201ENST00000547227 352 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.38□□□□□ -1.71
PEX3P56589 AC233266.2-201ENST00000567067 528 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.38□□□□□ -1.71
PEX3P56589 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.38□□□□□ -1.71
PEX3P56589 AC005242.1-201ENST00000585658 438 ntBASIC4.38□□□□□ -1.71
PEX3P56589 ZNF92P2-201ENST00000600543 1059 ntBASIC4.38□□□□□ -1.71
PEX3P56589 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.38□□□□□ -1.71
PEX3P56589 AL592436.1-201ENST00000605135 558 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms