Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.07□□□□□ -1.6
COPB1P53618 CCT8P1-201ENST00000413611 1657 ntBASIC5.07□□□□□ -1.6
COPB1P53618 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
COPB1P53618 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COPB1P53618 IRF5P1-201ENST00000504852 2164 ntBASIC5.06□□□□□ -1.6
COPB1P53618 LINC01355-201ENST00000566551 5444 ntBASIC5.06□□□□□ -1.6
COPB1P53618 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.06□□□□□ -1.6
COPB1P53618 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
COPB1P53618 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.06□□□□□ -1.6
COPB1P53618 AL391684.1-202ENST00000641293 1636 ntBASIC5.06□□□□□ -1.6
COPB1P53618 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.06□□□□□ -1.6
COPB1P53618 RNU5A-2P-201ENST00000384337 116 ntBASIC5.06□□□□□ -1.6
COPB1P53618 RSU1P3-201ENST00000412878 835 ntBASIC5.06□□□□□ -1.6
COPB1P53618 RPL21P108-201ENST00000413857 481 ntBASIC5.06□□□□□ -1.6
COPB1P53618 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.06□□□□□ -1.6
COPB1P53618 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 USP9YP26-201ENST00000421008 661 ntBASIC5.06□□□□□ -1.6
COPB1P53618 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.06□□□□□ -1.6
COPB1P53618 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.06□□□□□ -1.6
COPB1P53618 AC002542.1-201ENST00000440683 193 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 H2AFZP5-201ENST00000446960 382 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC104978.1-201ENST00000449387 391 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.06□□□□□ -1.6
COPB1P53618 OR52J1P-201ENST00000450596 932 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 AC108022.1-201ENST00000493466 478 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 AC025260.1-201ENST00000548858 430 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 EDDM3DP-201ENST00000554692 434 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 MTCYBP28-201ENST00000566728 1132 ntBASIC5.06□□□□□ -1.6
COPB1P53618 OR1F2P-201ENST00000570470 933 ntBASIC5.06□□□□□ -1.6
COPB1P53618 MIR3934-201ENST00000579806 107 ntBASIC5.06□□□□□ -1.6
COPB1P53618 SS18L2P2-201ENST00000583960 235 ntBASIC5.06□□□□□ -1.6
COPB1P53618 HMGB2P1-201ENST00000591146 634 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.06□□□□□ -1.6
COPB1P53618 AC125494.3-201ENST00000602759 455 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.06□□□□□ -1.6
COPB1P53618 AC133644.2-201ENST00000608142 540 ntBASIC5.06□□□□□ -1.6
COPB1P53618 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 AL353726.1-201ENST00000614041 1000 ntBASIC5.06□□□□□ -1.6
COPB1P53618 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC006840.1-201ENST00000623069 542 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AC007342.8-201ENST00000623278 678 ntBASIC5.06□□□□□ -1.6
COPB1P53618 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.06□□□□□ -1.6
COPB1P53618 U6.107-201ENST00000637108 79 ntBASIC5.06□□□□□ -1.6
COPB1P53618 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 AC010300.1-201ENST00000600671 5134 ntBASIC5.06□□□□□ -1.6
COPB1P53618 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
COPB1P53618 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
COPB1P53618 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
COPB1P53618 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
COPB1P53618 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.05□□□□□ -1.6
COPB1P53618 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 AC017104.4-201ENST00000636283 1592 ntBASIC5.05□□□□□ -1.6
COPB1P53618 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 RNA5SP191-201ENST00000362585 102 ntBASIC5.05□□□□□ -1.6
COPB1P53618 RNU6-666P-201ENST00000363499 107 ntBASIC5.05□□□□□ -1.6
COPB1P53618 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC5.05□□□□□ -1.6
COPB1P53618 VDAC2P1-201ENST00000399358 958 ntBASIC5.05□□□□□ -1.6
COPB1P53618 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
COPB1P53618 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.05□□□□□ -1.6
COPB1P53618 RN7SKP247-201ENST00000411094 308 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.05□□□□□ -1.6
COPB1P53618 AC105402.1-201ENST00000413336 545 ntBASIC5.05□□□□□ -1.6
COPB1P53618 PTP4A1P5-201ENST00000420305 455 ntBASIC5.05□□□□□ -1.6
COPB1P53618 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.05□□□□□ -1.6
COPB1P53618 RBMY2QP-201ENST00000429799 1147 ntBASIC5.05□□□□□ -1.6
COPB1P53618 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.05□□□□□ -1.6
COPB1P53618 AC092393.1-201ENST00000439625 742 ntBASIC5.05□□□□□ -1.6
COPB1P53618 CDY12P-201ENST00000440679 1015 ntBASIC5.05□□□□□ -1.6
COPB1P53618 CDY13P-201ENST00000445813 1015 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC005002.1-201ENST00000447458 540 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AC007327.1-201ENST00000447461 264 ntBASIC5.05□□□□□ -1.6
COPB1P53618 AL935212.3-201ENST00000450729 284 ntBASIC5.05□□□□□ -1.6
COPB1P53618 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms