Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 GTF2IP8-201ENST00000560687 584 ntBASIC4.45□□□□□ -1.7
NUP98P52948 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.45□□□□□ -1.7
NUP98P52948 VN1R92P-201ENST00000598511 928 ntBASIC4.45□□□□□ -1.7
NUP98P52948 EIF1P6-201ENST00000600054 334 ntBASIC4.45□□□□□ -1.7
NUP98P52948 OR2BH1P-201ENST00000608850 864 ntBASIC4.45□□□□□ -1.7
NUP98P52948 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
NUP98P52948 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
NUP98P52948 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.45□□□□□ -1.7
NUP98P52948 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
NUP98P52948 OR51C1P-202ENST00000641159 1444 ntBASIC4.44□□□□□ -1.7
NUP98P52948 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 AL591363.1-201ENST00000450091 483 ntBASIC4.44□□□□□ -1.7
NUP98P52948 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP98P52948 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP98P52948 SEPT14P1-201ENST00000458703 648 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP98P52948 AGGF1P3-201ENST00000493675 1213 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.44□□□□□ -1.7
NUP98P52948 OR4A2P-201ENST00000527276 913 ntBASIC4.44□□□□□ -1.7
NUP98P52948 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP98P52948 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.44□□□□□ -1.7
NUP98P52948 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP98P52948 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 AC068254.2-201ENST00000623938 3577 ntBASIC4.44□□□□□ -1.7
NUP98P52948 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 AC006484.1-201ENST00000435086 1884 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC091862.1-201ENST00000438016 1100 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC025445.1-201ENST00000502728 300 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.44□□□□□ -1.7
NUP98P52948 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
NUP98P52948 AC093014.1-201ENST00000548926 724 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.44□□□□□ -1.7
NUP98P52948 OOSP1P2-201ENST00000579644 351 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.44□□□□□ -1.7
NUP98P52948 AC125494.3-201ENST00000602759 455 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC022149.2-201ENST00000621061 203 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.44□□□□□ -1.7
NUP98P52948 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.44□□□□□ -1.7
NUP98P52948 AL078595.2-201ENST00000605309 1780 ntBASIC4.44□□□□□ -1.7
NUP98P52948 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP98P52948 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.43□□□□□ -1.7
NUP98P52948 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.43□□□□□ -1.7
NUP98P52948 MFSD8-233ENST00000641482 4860 ntBASIC4.43□□□□□ -1.7
NUP98P52948 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NUP98P52948 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.43□□□□□ -1.7
NUP98P52948 RPL21P109-201ENST00000422213 475 ntBASIC4.43□□□□□ -1.7
NUP98P52948 NDUFB1P1-201ENST00000435191 180 ntBASIC4.43□□□□□ -1.7
NUP98P52948 RPSAP41-201ENST00000439695 860 ntBASIC4.43□□□□□ -1.7
NUP98P52948 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 RN7SL809P-201ENST00000482040 297 ntBASIC4.43□□□□□ -1.7
NUP98P52948 RPS26P15-201ENST00000488067 348 ntBASIC4.43□□□□□ -1.7
NUP98P52948 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP98P52948 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.43□□□□□ -1.7
NUP98P52948 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP98P52948 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.43□□□□□ -1.7
NUP98P52948 AC007656.2-201ENST00000624902 4547 ntBASIC4.43□□□□□ -1.7
NUP98P52948 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NUP98P52948 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NUP98P52948 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.43□□□□□ -1.7
NUP98P52948 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP98P52948 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUP98P52948 AC139713.2-215ENST00000641428 5037 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC234772.1-201ENST00000377927 937 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AL034403.1-201ENST00000399414 885 ntBASIC4.42□□□□□ -1.7
NUP98P52948 MTHFD2P2-201ENST00000407725 247 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC017078.1-201ENST00000416146 368 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP98P52948 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.42□□□□□ -1.7
NUP98P52948 EIF4A1P11-201ENST00000451239 222 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
NUP98P52948 RNU6-579P-201ENST00000516879 102 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC079880.2-201ENST00000603790 1213 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AL163642.2-201ENST00000604722 1019 ntBASIC4.42□□□□□ -1.7
NUP98P52948 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.42□□□□□ -1.7
NUP98P52948 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.42□□□□□ -1.7
NUP98P52948 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NUP98P52948 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUP98P52948 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NUP98P52948 MOB1AP1-201ENST00000430903 535 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC092747.2-201ENST00000545069 983 ntBASIC4.42□□□□□ -1.7
NUP98P52948 CKS1BP3-201ENST00000600888 237 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC011816.2-201ENST00000607089 556 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.42□□□□□ -1.7
NUP98P52948 AP003392.5-201ENST00000607857 415 ntBASIC4.42□□□□□ -1.7
NUP98P52948 AP003355.3-201ENST00000623465 114 ntBASIC4.42□□□□□ -1.7
NUP98P52948 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NUP98P52948 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.41□□□□□ -1.7
NUP98P52948 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP98P52948 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.41□□□□□ -1.7
NUP98P52948 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NUP98P52948 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms