Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PRELID3BP5-201ENST00000508612 460 ntBASIC4.28□□□□□ -1.72
CASP4P49662 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.28□□□□□ -1.72
CASP4P49662 AC018552.3-201ENST00000567416 561 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.28□□□□□ -1.72
CASP4P49662 OR1AB1P-201ENST00000585564 761 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC010857.1-201ENST00000606398 594 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.28□□□□□ -1.72
CASP4P49662 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 AC016911.1-201ENST00000613297 452 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC068831.8-201ENST00000620171 435 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AC068724.3-201ENST00000625906 87 ntBASIC4.28□□□□□ -1.72
CASP4P49662 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.28□□□□□ -1.72
CASP4P49662 AC015813.6-201ENST00000624409 5808 ntBASIC4.28□□□□□ -1.72
CASP4P49662 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 KPNA2P2-201ENST00000419546 1489 ntBASIC4.28□□□□□ -1.72
CASP4P49662 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 AL359715.4-201ENST00000606629 1436 ntBASIC4.28□□□□□ -1.72
CASP4P49662 UBE3AP2-201ENST00000429033 2259 ntBASIC4.28□□□□□ -1.72
CASP4P49662 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CASP4P49662 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.28□□□□□ -1.72
CASP4P49662 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.73
CASP4P49662 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
CASP4P49662 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.27□□□□□ -1.73
CASP4P49662 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.27□□□□□ -1.73
CASP4P49662 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 AL450992.3-201ENST00000413192 568 ntBASIC4.27□□□□□ -1.73
CASP4P49662 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 AC092647.1-201ENST00000420654 287 ntBASIC4.27□□□□□ -1.73
CASP4P49662 SEC63P1-201ENST00000425785 1258 ntBASIC4.27□□□□□ -1.73
CASP4P49662 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
CASP4P49662 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.27□□□□□ -1.73
CASP4P49662 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 NDUFS5P3-201ENST00000450668 321 ntBASIC4.27□□□□□ -1.73
CASP4P49662 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.27□□□□□ -1.73
CASP4P49662 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.27□□□□□ -1.73
CASP4P49662 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 AC108157.1-201ENST00000510511 539 ntBASIC4.27□□□□□ -1.73
CASP4P49662 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
CASP4P49662 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 AC120057.2-201ENST00000571520 271 ntBASIC4.27□□□□□ -1.73
CASP4P49662 AC022884.3-201ENST00000579571 248 ntBASIC4.27□□□□□ -1.73
CASP4P49662 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 MRPS35P3-201ENST00000603189 709 ntBASIC4.27□□□□□ -1.73
CASP4P49662 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CASP4P49662 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CASP4P49662 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.27□□□□□ -1.73
CASP4P49662 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CASP4P49662 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 AC018555.1-201ENST00000567548 1980 ntBASIC4.27□□□□□ -1.73
CASP4P49662 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CASP4P49662 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
CASP4P49662 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
CASP4P49662 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASP4P49662 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CASP4P49662 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CASP4P49662 AP002001.2-201ENST00000529025 1469 ntBASIC4.26□□□□□ -1.73
CASP4P49662 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASP4P49662 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.26□□□□□ -1.73
CASP4P49662 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CASP4P49662 IQCB2P-201ENST00000401788 1633 ntBASIC4.26□□□□□ -1.73
CASP4P49662 RNA5SP502-201ENST00000362694 119 ntBASIC4.26□□□□□ -1.73
CASP4P49662 RNA5SP479-201ENST00000364858 117 ntBASIC4.26□□□□□ -1.73
CASP4P49662 RNU6-1279P-201ENST00000383917 103 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.26□□□□□ -1.73
CASP4P49662 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.26□□□□□ -1.73
CASP4P49662 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.26□□□□□ -1.73
CASP4P49662 AC096638.2-201ENST00000434965 711 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.26□□□□□ -1.73
CASP4P49662 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.26□□□□□ -1.73
CASP4P49662 RPL21P89-201ENST00000444021 467 ntBASIC4.26□□□□□ -1.73
CASP4P49662 HSFY6P-201ENST00000445573 403 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AL451050.1-201ENST00000450126 415 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.26□□□□□ -1.73
CASP4P49662 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.26□□□□□ -1.73
CASP4P49662 PPIAP15-201ENST00000479662 484 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.26□□□□□ -1.73
CASP4P49662 RN7SKP21-201ENST00000516503 220 ntBASIC4.26□□□□□ -1.73
CASP4P49662 RNU6-1308P-201ENST00000516817 103 ntBASIC4.26□□□□□ -1.73
CASP4P49662 RNU6-352P-201ENST00000516908 107 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.26□□□□□ -1.73
CASP4P49662 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.26□□□□□ -1.73
CASP4P49662 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.26□□□□□ -1.73
CASP4P49662 PSMA6P4-201ENST00000603247 718 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AL049844.2-201ENST00000604280 628 ntBASIC4.26□□□□□ -1.73
CASP4P49662 AC010200.2-201ENST00000605098 235 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms