Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 AL157770.1-201ENST00000623049 439 ntBASIC5.36□□□□□ -1.55
TM4SF4P48230 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.36□□□□□ -1.55
TM4SF4P48230 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
TM4SF4P48230 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TM4SF4P48230 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 Z95114.1-201ENST00000624264 14574 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 RNU1-132P-201ENST00000364300 164 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 RNU6-761P-201ENST00000384148 107 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 RNU6-575P-201ENST00000411326 105 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 PCNPP4-201ENST00000414817 517 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 RPS3AP54-201ENST00000435535 734 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 ZNF736P8Y-201ENST00000451913 669 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC048346.1-201ENST00000510247 144 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 RNU6-488P-201ENST00000515918 99 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 Y_RNA.717-201ENST00000517106 92 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC022069.1-201ENST00000582910 658 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC017100.2-201ENST00000584628 355 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 AP001269.3-201ENST00000588718 329 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 AC124312.6-202ENST00000623624 418 ntBASIC5.35□□□□□ -1.55
TM4SF4P48230 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
TM4SF4P48230 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM4SF4P48230 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.35□□□□□ -1.55
TM4SF4P48230 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
TM4SF4P48230 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM4SF4P48230 MIR372-201ENST00000362225 67 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 RNA5SP387-201ENST00000364226 106 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 snoZ40.1-201ENST00000364540 72 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 RNU6-707P-201ENST00000364647 95 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 RNA5SP283-201ENST00000365604 119 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 MIR513B-201ENST00000385136 84 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 PTMAP2-201ENST00000397627 327 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AL356320.2-201ENST00000417263 507 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF4P48230 MTCO2P21-201ENST00000419780 677 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF4P48230 USP9YP22-201ENST00000438971 294 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC023271.1-201ENST00000445936 1090 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.34□□□□□ -1.55
TM4SF4P48230 OR4C2P-201ENST00000530855 1064 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC027369.5-201ENST00000533838 755 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC004217.3-201ENST00000551552 878 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC007349.4-201ENST00000608114 532 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC024257.5-201ENST00000612739 531 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC105227.2-201ENST00000615075 605 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC009464.1-201ENST00000615731 469 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC009159.2-201ENST00000617603 606 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC243756.2-201ENST00000618406 463 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC109809.1-201ENST00000619665 545 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC011330.2-201ENST00000621680 635 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AC004777.1-201ENST00000624317 287 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 AP003072.4-201ENST00000624580 310 ntBASIC5.34□□□□□ -1.55
TM4SF4P48230 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.34□□□□□ -1.55
TM4SF4P48230 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms