Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 RNU6-729P-201ENST00000384399 107 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 RNU6-1263P-201ENST00000384601 106 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 Z86062.1-201ENST00000406773 777 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD4P46934 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 AC073508.1-201ENST00000428866 656 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 HMGB3P10-201ENST00000434734 572 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AP000949.1-201ENST00000438328 629 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AF228730.2-201ENST00000438784 848 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 RPS3AP6-201ENST00000484430 795 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.6□□□□□ -1.67
NEDD4P46934 AC021146.7-201ENST00000509604 775 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 CR383656.14-201ENST00000551951 406 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 NPM1P47-201ENST00000560843 856 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 SULT1C2P2-201ENST00000562517 294 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AC087499.8-201ENST00000578406 226 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AC005242.1-201ENST00000585658 438 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AC005014.3-201ENST00000605985 190 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AL512506.1-201ENST00000613918 449 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 AC025016.1-201ENST00000616746 682 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 AC097372.4-201ENST00000625025 466 ntBASIC4.6□□□□□ -1.67
NEDD4P46934 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.6□□□□□ -1.67
NEDD4P46934 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
NEDD4P46934 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NEDD4P46934 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD4P46934 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD4P46934 MIR137-201ENST00000385223 102 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 MIR199A2-201ENST00000385289 110 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AL034403.1-201ENST00000399414 885 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD4P46934 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 AL391219.1-201ENST00000422570 483 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD4P46934 AL513321.1-201ENST00000441175 761 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD4P46934 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.59□□□□□ -1.67
NEDD4P46934 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 AC027338.1-201ENST00000514840 825 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.59□□□□□ -1.67
NEDD4P46934 OR4R2P-201ENST00000530815 597 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AC233266.2-201ENST00000567067 528 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AC068790.5-201ENST00000602741 355 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 MTCO3P22-201ENST00000603219 784 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 KATNBL1P5-201ENST00000605015 517 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD4P46934 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NEDD4P46934 AP003400.6-201ENST00000624698 740 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.59□□□□□ -1.67
NEDD4P46934 OR5AC4P-202ENST00000642086 985 ntBASIC4.59□□□□□ -1.67
NEDD4P46934 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.59□□□□□ -1.67
NEDD4P46934 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD4P46934 AC017007.4-201ENST00000503353 1352 ntBASIC4.59□□□□□ -1.68
NEDD4P46934 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD4P46934 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
NEDD4P46934 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD4P46934 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 RNU4-7P-201ENST00000364758 141 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 U1.1-201ENST00000384101 164 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 TMX2P1-201ENST00000436507 708 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.58□□□□□ -1.68
NEDD4P46934 AC069277.2-201ENST00000454211 432 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 SUMO1P1-201ENST00000497904 306 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 PPM1AP1-201ENST00000502740 1135 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 AC103833.1-201ENST00000517442 172 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NEDD4P46934 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.58□□□□□ -1.68
NEDD4P46934 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.58□□□□□ -1.68
NEDD4P46934 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.58□□□□□ -1.68
NEDD4P46934 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.58□□□□□ -1.68
NEDD4P46934 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.58□□□□□ -1.68
NEDD4P46934 AL450270.1-201ENST00000606160 391 ntBASIC4.58□□□□□ -1.68
NEDD4P46934 AC084824.5-201ENST00000612009 413 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms