Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 HMGN2P27-201ENST00000427352 270 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC092017.2-201ENST00000427600 362 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 COX6CP13-201ENST00000428703 226 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 PRELID3BP10-201ENST00000431957 584 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AL031663.1-201ENST00000437445 219 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC006466.1-201ENST00000438721 289 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 RPS29P9-201ENST00000440360 171 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 MTCO2P3-201ENST00000442543 421 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AL137845.2-201ENST00000444292 988 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC6A4P31645 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 PRPF38AP1-201ENST00000451976 933 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 CBX1P2-201ENST00000453841 458 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC091180.1-201ENST00000462104 372 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 RPS3AP41-201ENST00000462701 778 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC104685.1-201ENST00000502445 371 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC010285.3-201ENST00000511668 676 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 BTF3P13-201ENST00000513224 490 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC6A4P31645 CR383656.6-201ENST00000550518 394 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC009852.2-201ENST00000567898 485 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC010487.1-201ENST00000594408 1172 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC073544.2-201ENST00000601155 540 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 DEFB131E-202ENST00000602581 683 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AP000254.1-201ENST00000609934 520 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC005332.6-201ENST00000613178 446 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC008083.4-201ENST00000615076 444 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC006338.2-201ENST00000616864 791 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC234782.5-201ENST00000617723 324 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC074140.1-201ENST00000621617 208 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC073348.1-201ENST00000623002 331 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC091932.2-201ENST00000623014 291 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC124312.6-202ENST00000623624 418 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AC138965.3-201ENST00000623875 498 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 AL359740.1-201ENST00000624340 592 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AC090582.1-201ENST00000636321 199 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 MAPK10-328ENST00000641553 4009 ntBASIC5.18□□□□□ -1.58
SLC6A4P31645 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC6A4P31645 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC6A4P31645 MTND4P4-201ENST00000439033 1366 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC6A4P31645 RBPJP2-201ENST00000618187 1444 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 SNORA4.1-201ENST00000364263 144 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 SNORA70.10-201ENST00000384515 134 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 FABP12P1-201ENST00000401911 322 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 OR6C64P-201ENST00000419708 825 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC6A4P31645 MTCO3P21-201ENST00000430791 643 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC6A4P31645 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC6A4P31645 RPL7P11-201ENST00000437586 658 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 CBX1P4-201ENST00000439415 457 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 MTND1P30-201ENST00000441241 901 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 TPTE2P6-202ENST00000445572 1007 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 COX6CP18-201ENST00000448769 222 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC6A4P31645 VN1R32P-201ENST00000452234 905 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.17□□□□□ -1.58
SLC6A4P31645 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC6A4P31645 AC015724.1-201ENST00000478577 156 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 RN7SL319P-201ENST00000480656 221 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 NCOR1P1-202ENST00000486162 291 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 RN7SL441P-201ENST00000492388 296 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 SETP14-201ENST00000497538 873 ntBASIC5.17□□□□□ -1.58
SLC6A4P31645 NIFKP7-201ENST00000503365 834 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms