Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.79□□□□□ -1.48
CLIP1P30622 RPL21P109-201ENST00000422213 475 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 MOB1AP1-201ENST00000430903 535 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP1P30622 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 AC007458.1-201ENST00000542812 373 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP1P30622 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC5.79□□□□□ -1.48
CLIP1P30622 AL163642.2-201ENST00000604722 1019 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 BNIP3P19-201ENST00000605397 577 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 AC244258.1-201ENST00000637553 1071 ntBASIC5.79□□□□□ -1.48
CLIP1P30622 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
CLIP1P30622 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CLIP1P30622 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP1P30622 MIR448-201ENST00000362131 111 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 MIR490-201ENST00000384865 128 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 NPM1P38-201ENST00000403835 865 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 AL158156.1-201ENST00000422509 473 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP1P30622 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.78□□□□□ -1.48
CLIP1P30622 EIF4A1P11-201ENST00000451239 222 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 AL133244.1-201ENST00000456007 258 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CLIP1P30622 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.78□□□□□ -1.48
CLIP1P30622 CSNK1A1P1-202ENST00000563423 981 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 EIF1P6-201ENST00000600054 334 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 AC133552.5-201ENST00000604266 540 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP1P30622 AC074276.2-201ENST00000619891 348 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.78□□□□□ -1.48
CLIP1P30622 MIR3651-201ENST00000630427 90 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 AL078595.2-201ENST00000605309 1780 ntBASIC5.78□□□□□ -1.48
CLIP1P30622 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLIP1P30622 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP1P30622 AC009229.4-201ENST00000623854 1947 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AC017079.2-201ENST00000416102 485 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AF228730.2-201ENST00000438784 848 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AL356535.1-201ENST00000440335 398 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP1P30622 AC099563.1-201ENST00000456086 418 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 SETP14-201ENST00000497538 873 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP1P30622 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC5.77□□□□□ -1.49
CLIP1P30622 HSPD1P15-201ENST00000505573 1122 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AC092747.2-201ENST00000545069 983 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AL133457.1-201ENST00000564251 987 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP1P30622 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP1P30622 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC5.77□□□□□ -1.49
CLIP1P30622 AC018555.1-201ENST00000567548 1980 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLIP1P30622 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.77□□□□□ -1.49
CLIP1P30622 SAGE2P-201ENST00000420011 2126 ntBASIC5.77□□□□□ -1.49
CLIP1P30622 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.76□□□□□ -1.49
CLIP1P30622 RNU1-33P-201ENST00000364249 162 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 DPY19L1P2-201ENST00000426647 915 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP1P30622 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP1P30622 CYCSP35-201ENST00000451978 304 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 RBMY2UP-201ENST00000453474 324 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP1P30622 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP1P30622 AC004069.2-201ENST00000505438 1114 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 AC008489.1-201ENST00000524271 483 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.76□□□□□ -1.49
CLIP1P30622 DPRXP4-201ENST00000578053 568 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CLIP1P30622 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP1P30622 AL732618.1-201ENST00000623251 301 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 PCNP-208ENST00000627393 136 ntTSL 2 BASIC5.76□□□□□ -1.49
CLIP1P30622 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP1P30622 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.76□□□□□ -1.49
CLIP1P30622 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP1P30622 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC5.76□□□□□ -1.49
CLIP1P30622 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLIP1P30622 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CLIP1P30622 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 USP12PY-201ENST00000427677 1064 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 RPL21P110-201ENST00000433345 446 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 TMX2P1-201ENST00000436507 708 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.75□□□□□ -1.49
CLIP1P30622 AC010342.1-201ENST00000514047 877 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC5.75□□□□□ -1.49
CLIP1P30622 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.75□□□□□ -1.49
CLIP1P30622 AC027281.1-201ENST00000574178 758 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 VN1R92P-201ENST00000598511 928 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 AC009237.17-201ENST00000618111 748 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CLIP1P30622 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CLIP1P30622 AL365440.1-201ENST00000436135 2167 ntBASIC5.75□□□□□ -1.49
CLIP1P30622 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms