Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 MTCO1P40-201ENST00000574371 625 ntBASIC6.82□□□□□ -1.32
RXRBP28702 MIR5708-201ENST00000579723 85 ntBASIC6.82□□□□□ -1.32
RXRBP28702 AC006115.2-201ENST00000596823 202 ntBASIC6.82□□□□□ -1.32
RXRBP28702 AC011497.2-201ENST00000600255 639 ntBASIC6.82□□□□□ -1.32
RXRBP28702 AL390816.3-201ENST00000604527 1066 ntBASIC6.82□□□□□ -1.32
RXRBP28702 AC018690.1-201ENST00000608144 626 ntBASIC6.82□□□□□ -1.32
RXRBP28702 MIR6853-201ENST00000619642 74 ntBASIC6.82□□□□□ -1.32
RXRBP28702 AL133370.2-201ENST00000619934 439 ntBASIC6.82□□□□□ -1.32
RXRBP28702 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.82□□□□□ -1.32
RXRBP28702 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
RXRBP28702 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.82□□□□□ -1.32
RXRBP28702 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RXRBP28702 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RXRBP28702 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.82□□□□□ -1.32
RXRBP28702 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.82□□□□□ -1.32
RXRBP28702 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.82□□□□□ -1.32
RXRBP28702 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
RXRBP28702 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
RXRBP28702 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.82□□□□□ -1.32
RXRBP28702 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
RXRBP28702 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 AC090220.1-201ENST00000593078 1699 ntBASIC6.81□□□□□ -1.32
RXRBP28702 NAMPTP1-201ENST00000440465 2514 ntBASIC6.81□□□□□ -1.32
RXRBP28702 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 OR1L6-202ENST00000373684 1044 ntBASIC6.81□□□□□ -1.32
RXRBP28702 SNORA70C-201ENST00000384538 135 ntBASIC6.81□□□□□ -1.32
RXRBP28702 RPS7P13-201ENST00000413955 498 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC012498.1-201ENST00000424037 437 ntBASIC6.81□□□□□ -1.32
RXRBP28702 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC6.81□□□□□ -1.32
RXRBP28702 AL353748.1-201ENST00000440753 474 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.81□□□□□ -1.32
RXRBP28702 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 OR9M1P-201ENST00000459641 921 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC104849.1-201ENST00000462623 405 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC091951.2-201ENST00000500762 203 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC008628.2-201ENST00000502605 298 ntBASIC6.81□□□□□ -1.32
RXRBP28702 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC6.81□□□□□ -1.32
RXRBP28702 RNU6-875P-201ENST00000516488 106 ntBASIC6.81□□□□□ -1.32
RXRBP28702 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC6.81□□□□□ -1.32
RXRBP28702 SMARCE1P4-201ENST00000523647 241 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC6.81□□□□□ -1.32
RXRBP28702 SUMO2P14-201ENST00000604488 293 ntBASIC6.81□□□□□ -1.32
RXRBP28702 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC6.81□□□□□ -1.32
RXRBP28702 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RXRBP28702 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.81□□□□□ -1.32
RXRBP28702 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RXRBP28702 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.8□□□□□ -1.32
RXRBP28702 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RXRBP28702 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RXRBP28702 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 SNORD8-201ENST00000363915 110 ntBASIC6.8□□□□□ -1.32
RXRBP28702 RNU6-1251P-201ENST00000364502 107 ntBASIC6.8□□□□□ -1.32
RXRBP28702 OR1L1-202ENST00000373686 1083 ntBASIC6.8□□□□□ -1.32
RXRBP28702 MIR181A1-201ENST00000385026 110 ntBASIC6.8□□□□□ -1.32
RXRBP28702 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 DNAJC19P6-201ENST00000401853 280 ntBASIC6.8□□□□□ -1.32
RXRBP28702 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.8□□□□□ -1.32
RXRBP28702 RPL34P27-201ENST00000428810 349 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC6.8□□□□□ -1.32
RXRBP28702 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.8□□□□□ -1.32
RXRBP28702 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 VN1R10P-201ENST00000447106 875 ntBASIC6.8□□□□□ -1.32
RXRBP28702 FTH1P25-201ENST00000447665 469 ntBASIC6.8□□□□□ -1.32
RXRBP28702 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC6.8□□□□□ -1.32
RXRBP28702 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.8□□□□□ -1.32
RXRBP28702 AC069439.1-201ENST00000494739 167 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AC023632.1-201ENST00000518463 375 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 DEFB108A-201ENST00000530110 222 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RXRBP28702 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC6.8□□□□□ -1.32
RXRBP28702 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.8□□□□□ -1.32
RXRBP28702 MIR4420-201ENST00000583944 77 ntBASIC6.8□□□□□ -1.32
RXRBP28702 AP000769.2-201ENST00000602344 396 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms