Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 DHX40P1-201ENST00000588725 1412 ntBASIC4.95□□□□□ -1.62
BDNFP23560 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
BDNFP23560 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
BDNFP23560 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BDNFP23560 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
BDNFP23560 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
BDNFP23560 ZFRP1-201ENST00000457579 2970 ntBASIC4.95□□□□□ -1.62
BDNFP23560 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
BDNFP23560 SNORA63.3-201ENST00000362682 132 ntBASIC4.94□□□□□ -1.62
BDNFP23560 RPS3AP23-201ENST00000401762 784 ntBASIC4.94□□□□□ -1.62
BDNFP23560 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.94□□□□□ -1.62
BDNFP23560 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
BDNFP23560 AC019070.1-201ENST00000415008 1024 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AC005517.2-201ENST00000424673 553 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 AC234064.1-201ENST00000436312 247 ntBASIC4.94□□□□□ -1.62
BDNFP23560 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 ARL2BPP10-201ENST00000446487 531 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AL096829.2-201ENST00000446582 742 ntBASIC4.94□□□□□ -1.62
BDNFP23560 Z99714.1-201ENST00000450463 807 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.94□□□□□ -1.62
BDNFP23560 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 AC090142.1-201ENST00000465776 462 ntBASIC4.94□□□□□ -1.62
BDNFP23560 RPL36AP41-201ENST00000493820 306 ntBASIC4.94□□□□□ -1.62
BDNFP23560 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.94□□□□□ -1.62
BDNFP23560 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AC005921.1-201ENST00000510589 286 ntBASIC4.94□□□□□ -1.62
BDNFP23560 MTCO1P30-201ENST00000515244 580 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.94□□□□□ -1.62
BDNFP23560 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.94□□□□□ -1.62
BDNFP23560 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.94□□□□□ -1.62
BDNFP23560 AC092451.2-201ENST00000538746 658 ntBASIC4.94□□□□□ -1.62
BDNFP23560 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.94□□□□□ -1.62
BDNFP23560 AC010735.1-201ENST00000567305 1026 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AC209154.1-201ENST00000582156 337 ntBASIC4.94□□□□□ -1.62
BDNFP23560 OR4G1P-201ENST00000588632 938 ntBASIC4.94□□□□□ -1.62
BDNFP23560 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 AL355812.1-201ENST00000603215 216 ntBASIC4.94□□□□□ -1.62
BDNFP23560 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
BDNFP23560 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
BDNFP23560 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
BDNFP23560 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
BDNFP23560 LINC01355-201ENST00000566551 5444 ntBASIC4.94□□□□□ -1.62
BDNFP23560 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.94□□□□□ -1.62
BDNFP23560 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.94□□□□□ -1.62
BDNFP23560 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 AC107068.1-201ENST00000563286 4218 ntBASIC4.93□□□□□ -1.62
BDNFP23560 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 RNU1-32P-201ENST00000363937 159 ntBASIC4.93□□□□□ -1.62
BDNFP23560 RNA5SP397-201ENST00000391323 118 ntBASIC4.93□□□□□ -1.62
BDNFP23560 FAR2P2-201ENST00000413041 594 ntBASIC4.93□□□□□ -1.62
BDNFP23560 MTND4P22-201ENST00000413116 1169 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 CENPIP1-201ENST00000425713 902 ntBASIC4.93□□□□□ -1.62
BDNFP23560 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.93□□□□□ -1.62
BDNFP23560 AC044797.1-201ENST00000445744 679 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.93□□□□□ -1.62
BDNFP23560 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.93□□□□□ -1.62
BDNFP23560 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.93□□□□□ -1.62
BDNFP23560 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 AC104763.1-201ENST00000475274 360 ntBASIC4.93□□□□□ -1.62
BDNFP23560 TMED11P-201ENST00000479478 690 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AC078918.1-201ENST00000498515 228 ntBASIC4.93□□□□□ -1.62
BDNFP23560 MTND4LP2-201ENST00000502312 285 ntBASIC4.93□□□□□ -1.62
BDNFP23560 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 AK3P4-201ENST00000504283 583 ntBASIC4.93□□□□□ -1.62
BDNFP23560 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.93□□□□□ -1.62
BDNFP23560 AC010476.1-201ENST00000519111 851 ntBASIC4.93□□□□□ -1.62
BDNFP23560 IGLVIV-53-201ENST00000520107 367 ntBASIC4.93□□□□□ -1.62
BDNFP23560 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
BDNFP23560 AC087894.1-201ENST00000538359 518 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.93□□□□□ -1.62
BDNFP23560 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.93□□□□□ -1.62
BDNFP23560 MTCO1P40-201ENST00000574371 625 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AC006270.2-201ENST00000578523 652 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.93□□□□□ -1.62
BDNFP23560 AC002487.1-201ENST00000604565 994 ntBASIC4.93□□□□□ -1.62
BDNFP23560 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.93□□□□□ -1.62
BDNFP23560 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms