Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 FTH1P16-201ENST00000435241 552 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 AC006466.1-201ENST00000438721 289 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 EIF2S2P2-201ENST00000447161 982 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 PPIAP3-201ENST00000450588 505 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 RPL37P6-202ENST00000464216 403 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 RPL35P6-201ENST00000490024 372 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 IGKV2D-23-201ENST00000518179 286 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 MIR4480-201ENST00000582492 71 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.63□□□□□ -1.83
UBCP0CG48 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.63□□□□□ -1.83
UBCP0CG48 RPL12P25-202ENST00000598100 674 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 AL049634.3-201ENST00000604968 457 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 RNA5SP108-201ENST00000605921 117 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 AC113194.1-201ENST00000606037 500 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 MIR6719-201ENST00000622428 87 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.63□□□□□ -1.83
UBCP0CG48 CDRT1-208ENST00000630868 794 ntBASIC3.63□□□□□ -1.83
UBCP0CG48 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.63□□□□□ -1.83
UBCP0CG48 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.63□□□□□ -1.83
UBCP0CG48 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
UBCP0CG48 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
UBCP0CG48 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
UBCP0CG48 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
UBCP0CG48 SNORA27.3-201ENST00000364937 134 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBCP0CG48 RPL23AP59-201ENST00000399415 461 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 RN7SKP235-201ENST00000410662 305 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 MFSD13B-201ENST00000420133 1290 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC115285.1-201ENST00000424879 736 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 FAR2P4-202ENST00000425399 584 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AL590762.4-201ENST00000425885 253 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.62□□□□□ -1.83
UBCP0CG48 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 ARL5AP2-201ENST00000444698 533 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.62□□□□□ -1.83
UBCP0CG48 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.62□□□□□ -1.83
UBCP0CG48 MTND2P28-201ENST00000457540 1044 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC010342.1-201ENST00000514047 877 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.62□□□□□ -1.83
UBCP0CG48 RN7SKP234-201ENST00000517173 224 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC3.62□□□□□ -1.83
UBCP0CG48 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 AC007599.1-201ENST00000568688 1174 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 MIR4644-201ENST00000579929 84 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 AC013244.1-201ENST00000604279 193 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 SUMO2P14-201ENST00000604488 293 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBCP0CG48 HSPA8P1-201ENST00000425843 1833 ntBASIC3.62□□□□□ -1.83
UBCP0CG48 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.62□□□□□ -1.83
UBCP0CG48 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
UBCP0CG48 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBCP0CG48 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.62□□□□□ -1.83
UBCP0CG48 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
UBCP0CG48 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
UBCP0CG48 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.61□□□□□ -1.83
UBCP0CG48 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 MTCO1P8-201ENST00000416914 1523 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.61□□□□□ -1.83
UBCP0CG48 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.61□□□□□ -1.83
UBCP0CG48 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBCP0CG48 AC079741.1-201ENST00000321498 212 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.61□□□□□ -1.83
UBCP0CG48 SNORA37-201ENST00000384504 129 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 RPS16P5-201ENST00000406501 404 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 Z98941.1-201ENST00000407764 100 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 RN7SKP278-201ENST00000410504 342 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 RNU2-6P-201ENST00000411404 190 ntBASIC3.61□□□□□ -1.83
UBCP0CG48 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms