Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNU6-906P-201ENST00000384700 70 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AL603865.2-201ENST00000401679 213 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 GSTA12P-201ENST00000402398 508 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 SNORA74C-2-201ENST00000411179 201 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 TATDN1P1-201ENST00000414123 891 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 UBE2V1P9-201ENST00000414760 368 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC6P09630 AL449283.1-202ENST00000418249 604 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 KRR1P1-201ENST00000419430 803 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 OSTCP5-201ENST00000425293 453 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 DEFB130D-201ENST00000426866 237 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 RPL21P91-201ENST00000429231 479 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 MTND5P25-201ENST00000430499 799 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AL445433.1-201ENST00000457507 257 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC6P09630 RPL23AP37-201ENST00000479658 549 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 VN1R105P-201ENST00000486595 910 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC108022.1-201ENST00000493466 478 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC6P09630 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC117522.2-201ENST00000510049 657 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC138938.1-201ENST00000515431 782 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 RNA5SP446-201ENST00000515955 82 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC008126.1-201ENST00000549019 480 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC104229.1-201ENST00000561364 255 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC002487.1-201ENST00000604565 994 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 AC005021.1-201ENST00000608730 355 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC092954.1-201ENST00000609121 445 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC097505.1-201ENST00000610199 565 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC6P09630 MIR6875-201ENST00000617506 72 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 U6.48-201ENST00000618523 106 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 RMST_5.1-201ENST00000618704 126 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC015722.2-201ENST00000622210 551 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC091905.2-201ENST00000623143 306 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AP003485.2-201ENST00000623636 610 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC112200.1-201ENST00000625015 234 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 NXPH1-205ENST00000602349 1953 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC6P09630 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
HOXC6P09630 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 AL355578.1-201ENST00000607405 1328 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 AC008432.1-201ENST00000615912 1320 ntBASIC4.9□□□□□ -1.63
HOXC6P09630 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.63
HOXC6P09630 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC6P09630 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.89□□□□□ -1.63
HOXC6P09630 AL592182.3-201ENST00000642132 3304 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC6P09630 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC6P09630 RNA5SP307-201ENST00000362863 116 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 RNA5SP151-201ENST00000365632 117 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 MIR670-201ENST00000390142 98 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 AC097374.1-203ENST00000400783 485 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 RNA5SP36-201ENST00000410197 133 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 RN7SKP97-201ENST00000410966 333 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC108032.1-201ENST00000416706 207 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC234781.4-201ENST00000419384 244 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 OR2X1P-201ENST00000421144 687 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC6P09630 ARF4P4-201ENST00000439608 520 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 SNRPFP2-201ENST00000440710 251 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 SETD6P1-201ENST00000444575 317 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC6P09630 VN1R34P-201ENST00000447387 883 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC6P09630 VN1R40P-201ENST00000455196 941 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AL591473.1-201ENST00000464297 313 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC112206.1-201ENST00000468416 477 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC6P09630 AC113420.1-201ENST00000507903 571 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC6P09630 FTH1P21-201ENST00000512179 511 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 MTCO3P28-201ENST00000513351 515 ntBASIC4.89□□□□□ -1.63
HOXC6P09630 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms