Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AL451142.2-201ENST00000429076 2090 ntBASIC3.94□□□□□ -1.78
HOXC4P09017 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXC4P09017 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXC4P09017 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXC4P09017 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 MARK2P15-201ENST00000432204 2186 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HOXC4P09017 MIR134-201ENST00000385258 73 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.93□□□□□ -1.78
HOXC4P09017 RN7SKP202-201ENST00000410439 330 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC4P09017 RPL7P2-201ENST00000427639 268 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 HIGD1AP4-201ENST00000430194 280 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC4P09017 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC4P09017 RSL24D1P8-201ENST00000434442 492 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 TBCAP1-201ENST00000436520 327 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 AC083863.1-201ENST00000438811 231 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.93□□□□□ -1.78
HOXC4P09017 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.93□□□□□ -1.78
HOXC4P09017 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 CYCSP30-201ENST00000546447 172 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 HSPE1P5-201ENST00000561489 272 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 AC123786.2-201ENST00000603459 275 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC092953.2-201ENST00000608000 699 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AL139089.1-201ENST00000620372 975 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.93□□□□□ -1.78
HOXC4P09017 AL354798.1-201ENST00000622505 329 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 AC008725.1-201ENST00000605123 2263 ntBASIC3.93□□□□□ -1.78
HOXC4P09017 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXC4P09017 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HOXC4P09017 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC4P09017 SNORD74.4-201ENST00000364129 80 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC083799.1-201ENST00000366451 910 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXC4P09017 AL450992.3-201ENST00000413192 568 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 CYP4F29P-201ENST00000420685 446 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 MTND2P11-201ENST00000423638 648 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AJ239321.1-201ENST00000424255 564 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 RPS6P12-201ENST00000432491 726 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 RPL7P28-201ENST00000437739 740 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 OR9M1P-201ENST00000459641 921 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC089999.1-201ENST00000460336 374 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC104629.2-201ENST00000468627 598 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC147055.1-201ENST00000509261 750 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 MTCO1P49-201ENST00000523429 802 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXC4P09017 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HOXC4P09017 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC034105.4-201ENST00000568304 277 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 MIR5685-201ENST00000579080 79 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC3.92□□□□□ -1.78
HOXC4P09017 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXC4P09017 AC091167.4-201ENST00000605079 184 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 BX322635.1-201ENST00000605804 496 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC099669.2-201ENST00000616549 437 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AL391597.1-201ENST00000618707 694 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 AC073592.7-201ENST00000623659 507 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXC4P09017 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
HOXC4P09017 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXC4P09017 AL627171.1-201ENST00000618845 1308 ntBASIC3.92□□□□□ -1.78
HOXC4P09017 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.92□□□□□ -1.78
HOXC4P09017 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 AC009229.4-201ENST00000623854 1947 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXC4P09017 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 OR5T3-201ENST00000303059 1023 ntBASIC3.91□□□□□ -1.78
HOXC4P09017 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXC4P09017 RNA5SP399-201ENST00000364003 117 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms