Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 RNU6-178P-201ENST00000384631 104 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AL589655.1-201ENST00000405398 482 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 HSPE1P8-201ENST00000406997 288 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AL603766.1-201ENST00000407763 664 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 COX6CP17-201ENST00000421389 185 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MTCO3P21-201ENST00000430791 643 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AL358472.1-201ENST00000431295 329 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 SKP1P1-201ENST00000438081 489 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MTND2P3-201ENST00000452458 470 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC098824.1-201ENST00000453565 980 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC005229.2-201ENST00000456995 399 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC092691.2-201ENST00000461787 803 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 RPS23P7-201ENST00000466210 444 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC005912.1-201ENST00000495392 255 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC010627.1-201ENST00000503819 1294 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MTCO1P31-201ENST00000506355 492 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC021146.1-201ENST00000511202 716 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MRPL49P2-201ENST00000521066 465 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AP003730.1-201ENST00000524605 285 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC099489.2-201ENST00000574976 260 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC025627.2-201ENST00000576220 160 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MTCO3P22-201ENST00000603219 784 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AC020910.2-201ENST00000603635 610 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 KATNBL1P1-201ENST00000605192 748 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 BRDTP1-201ENST00000605735 677 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MIR8059-201ENST00000620427 81 ntBASIC3.53□□□□□ -1.84
HLA-DPB1P04440 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.53□□□□□ -1.84
HLA-DPB1P04440 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.53□□□□□ -1.85
HLA-DPB1P04440 DDX6P1-205ENST00000441966 1436 ntBASIC3.53□□□□□ -1.85
HLA-DPB1P04440 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC092079.1-201ENST00000558620 1985 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RNA5SP443-201ENST00000363083 132 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RNU1-87P-201ENST00000363727 170 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 SNORA62-201ENST00000365493 153 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL049693.1-201ENST00000402760 611 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL512430.2-201ENST00000406786 339 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RANP4-201ENST00000413361 655 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RPL7AP73-201ENST00000413490 353 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 OR5AW1P-201ENST00000426334 1006 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RPS26P40-201ENST00000435209 294 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AL513343.1-201ENST00000451818 792 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 CEACAMP10-202ENST00000495431 496 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RPS27AP13-201ENST00000498403 237 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 IGBP1P5-201ENST00000507524 1000 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC108157.1-201ENST00000510511 539 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RNU6-362P-201ENST00000516736 90 ntBASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.52□□□□□ -1.85
HLA-DPB1P04440 AC022884.3-201ENST00000579571 248 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms