Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 AL031736.2-201ENST00000426573 787 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 OR4F13P-201ENST00000428478 931 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 RPSAP65-201ENST00000429660 595 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AL590233.1-201ENST00000430017 456 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AC108734.1-201ENST00000439549 399 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 AL035090.1-201ENST00000454835 332 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 ATP5LP5-201ENST00000483050 299 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AL163973.1-201ENST00000484753 577 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC096576.1-201ENST00000489014 359 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.11□□□□□ -1.43
PDGFAP04085 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 ZNF519P4-201ENST00000514008 125 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 EEF1B2P2-201ENST00000519625 676 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 SUB1P1-201ENST00000524415 382 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PDGFAP04085 BNIP3P6-201ENST00000549284 499 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC090615.1-201ENST00000577519 154 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.11□□□□□ -1.43
PDGFAP04085 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 MIR7854-201ENST00000620068 65 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AC018628.1-201ENST00000624147 3819 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 AC073488.9-201ENST00000631601 754 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 AC011504.1-201ENST00000623331 4103 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
PDGFAP04085 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 AL606537.1-201ENST00000607258 2011 ntBASIC6.11□□□□□ -1.43
PDGFAP04085 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PDGFAP04085 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PDGFAP04085 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 ZNF736P3Y-201ENST00000428264 1465 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AC104966.1-201ENST00000467010 1464 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 CLCA3P-203ENST00000490028 2781 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 Y_RNA.474-201ENST00000384341 102 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 RPL32P23-201ENST00000397237 405 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDGFAP04085 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC127526.1-201ENST00000417526 366 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AL356276.2-201ENST00000435919 558 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 AC093156.1-201ENST00000440382 670 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 RN7SL221P-201ENST00000466190 281 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 RPS15AP36-201ENST00000492022 382 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AK3P4-201ENST00000504283 583 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFAP04085 SCARNA24.1-201ENST00000516465 137 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 RNU6-1314P-201ENST00000517139 104 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AL163952.1-202ENST00000569625 600 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC007448.1-201ENST00000582714 234 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AC068831.8-201ENST00000620171 435 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC129915.3-201ENST00000634128 948 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 AC005225.5-201ENST00000623547 2225 ntBASIC6.1□□□□□ -1.43
PDGFAP04085 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFAP04085 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PDGFAP04085 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFAP04085 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms