Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 MIR423-201ENST00000362201 94 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 RPL31P52-201ENST00000407532 367 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC096638.2-201ENST00000434965 711 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 RPS26P40-201ENST00000435209 294 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 NUTF2P3-201ENST00000448540 384 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 CCRL1P1-201ENST00000449542 1053 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 HMGN2P7-201ENST00000456186 273 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC011037.1-201ENST00000483964 558 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.84□□□□□ -1.79
SEMA3DO95025 SEC11B-201ENST00000518383 499 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AC022790.1-201ENST00000522872 204 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 CYCSP29-201ENST00000533731 318 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.84□□□□□ -1.79
SEMA3DO95025 RN7SL600P-201ENST00000581811 299 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 ARF4P1-201ENST00000605447 541 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AC010857.1-201ENST00000606398 594 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AL023583.1-201ENST00000607518 1143 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AP000255.1-201ENST00000610276 676 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AC012531.5-201ENST00000611375 151 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 MIR6716-201ENST00000613413 80 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 AL391597.1-201ENST00000618707 694 ntBASIC3.84□□□□□ -1.79
SEMA3DO95025 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.84□□□□□ -1.79
SEMA3DO95025 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.84□□□□□ -1.79
SEMA3DO95025 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SEMA3DO95025 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SEMA3DO95025 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SEMA3DO95025 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SEMA3DO95025 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 TNPO1P3-201ENST00000436471 2662 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 SNORA56-201ENST00000383966 129 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 MIR92A2-201ENST00000385299 75 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 Z98941.1-201ENST00000407764 100 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 OR5BE1P-201ENST00000425977 939 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AL392003.1-201ENST00000434394 243 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AL356535.1-201ENST00000440335 398 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 VN1R25P-201ENST00000443385 738 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.83□□□□□ -1.8
SEMA3DO95025 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 RPL31P20-201ENST00000449593 360 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.83□□□□□ -1.8
SEMA3DO95025 VN1R40P-201ENST00000455196 941 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.83□□□□□ -1.8
SEMA3DO95025 NIPA2P2-201ENST00000496376 1083 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.83□□□□□ -1.8
SEMA3DO95025 MRPL49P2-201ENST00000521066 465 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC091516.1-201ENST00000549191 703 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 EIF1AXP2-201ENST00000555940 413 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC3.83□□□□□ -1.8
SEMA3DO95025 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.83□□□□□ -1.8
SEMA3DO95025 KPNA2P3-201ENST00000584190 848 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC034236.3-201ENST00000605999 461 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AP003392.5-201ENST00000607857 415 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC005962.2-201ENST00000611427 652 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.83□□□□□ -1.8
SEMA3DO95025 AC124312.6-202ENST00000623624 418 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 OR5BE1P-202ENST00000641168 1176 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SEMA3DO95025 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.83□□□□□ -1.8
SEMA3DO95025 AC138393.1-206ENST00000540997 1886 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms