Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
ZIC3O60481 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
ZIC3O60481 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
ZIC3O60481 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
ZIC3O60481 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.3□□□□□ -1.72
ZIC3O60481 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC010928.1-201ENST00000592477 1447 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC134882.1-201ENST00000603738 1676 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL034370.1-201ENST00000397254 1590 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL590762.2-201ENST00000395798 571 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 CYB5AP4-201ENST00000396692 399 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 MIR298-201ENST00000401212 88 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 ARL4AP5-201ENST00000404372 599 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL590139.1-201ENST00000416267 400 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 MFSD13B-201ENST00000420133 1290 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 PTP4A1P5-201ENST00000420305 455 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 E2F6P2-201ENST00000420708 748 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL365338.1-201ENST00000422282 858 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 FABP7P1-201ENST00000424004 391 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 ATP5F1P1-201ENST00000433775 569 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL359265.2-201ENST00000434367 631 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC004938.1-201ENST00000438468 308 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL589765.3-201ENST00000446084 462 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 Z99714.1-201ENST00000450463 807 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL354710.1-201ENST00000453641 246 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL513533.1-201ENST00000453728 415 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 ZFRP1-201ENST00000457579 2970 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 PNPLA4P1-201ENST00000458328 305 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC010326.1-201ENST00000462726 602 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 RPS29P22-201ENST00000472363 168 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC104689.1-201ENST00000473356 768 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 BET1P1-201ENST00000482276 359 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC007686.1-201ENST00000488511 463 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC023424.1-201ENST00000496058 459 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC109471.1-201ENST00000511631 612 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.29□□□□□ -1.72
ZIC3O60481 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 HIGD1AP6-201ENST00000521833 279 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.29□□□□□ -1.72
ZIC3O60481 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC063949.1-201ENST00000552900 865 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC109446.2-201ENST00000567872 497 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 RN7SL652P-201ENST00000577769 300 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.29□□□□□ -1.72
ZIC3O60481 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.29□□□□□ -1.72
ZIC3O60481 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 AL390816.3-201ENST00000604527 1066 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AL355816.1-201ENST00000607951 118 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
ZIC3O60481 MIR3974-201ENST00000637126 96 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AP003399.1-201ENST00000637534 361 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 AC103706.2-201ENST00000638080 240 ntBASIC4.29□□□□□ -1.72
ZIC3O60481 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
ZIC3O60481 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ZIC3O60481 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.29□□□□□ -1.72
ZIC3O60481 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
ZIC3O60481 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.28□□□□□ -1.72
ZIC3O60481 AC092162.3-201ENST00000624511 1624 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.28□□□□□ -1.72
ZIC3O60481 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 AC109315.1-201ENST00000584143 1347 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.28□□□□□ -1.72
ZIC3O60481 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
ZIC3O60481 AC079741.1-201ENST00000321498 212 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
ZIC3O60481 RNU6-1151P-201ENST00000384684 107 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 AL161909.1-201ENST00000397390 712 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 U3.35-201ENST00000408405 208 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 RNU6-757P-201ENST00000410334 100 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 RNU2-50P-201ENST00000410494 143 ntBASIC4.28□□□□□ -1.72
ZIC3O60481 RNU4-72P-201ENST00000410754 173 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms