Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
GRIN3BO60391 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.44□□□□□ -1.38
GRIN3BO60391 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 Y_RNA.88-201ENST00000363029 99 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AL592293.2-201ENST00000422292 996 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC104651.1-201ENST00000427559 735 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC6.44□□□□□ -1.38
GRIN3BO60391 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AL512286.1-201ENST00000439244 400 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC092754.1-201ENST00000472975 479 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 ATP5LP5-201ENST00000483050 299 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC138853.1-201ENST00000503549 823 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC098799.3-201ENST00000506095 438 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.44□□□□□ -1.38
GRIN3BO60391 TCP11X3P-202ENST00000514289 1254 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 RNA5SP135-201ENST00000517019 125 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.44□□□□□ -1.38
GRIN3BO60391 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC074029.1-201ENST00000552531 1044 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 ANKRD36BP2-206ENST00000575193 1245 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC020914.6-201ENST00000594327 272 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC006115.2-201ENST00000596823 202 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC011451.2-201ENST00000604303 598 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AL390816.3-201ENST00000604527 1066 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC090525.3-201ENST00000605601 189 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AP004247.3-201ENST00000608682 624 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AL589743.7-201ENST00000612637 233 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC145207.9-201ENST00000623802 325 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.44□□□□□ -1.38
GRIN3BO60391 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
GRIN3BO60391 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.44□□□□□ -1.38
GRIN3BO60391 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 AC097063.1-201ENST00000426714 1797 ntBASIC6.44□□□□□ -1.38
GRIN3BO60391 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
GRIN3BO60391 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
GRIN3BO60391 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GRIN3BO60391 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
GRIN3BO60391 DBF4P1-201ENST00000412976 1892 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.43□□□□□ -1.38
GRIN3BO60391 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 RNU1-146P-201ENST00000364015 165 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
GRIN3BO60391 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 RNY3P14-201ENST00000384309 102 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
GRIN3BO60391 SNORA11.2-201ENST00000408318 127 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 MIR1303-201ENST00000408625 86 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC6.43□□□□□ -1.38
GRIN3BO60391 EI24P4-201ENST00000423683 1078 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 ISCA1P1-201ENST00000426679 387 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AL139415.2-201ENST00000431968 163 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 USP24P1-201ENST00000433802 779 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.43□□□□□ -1.38
GRIN3BO60391 RPL7P11-201ENST00000437586 658 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 RPL34P20-201ENST00000442771 351 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AP000542.1-201ENST00000448473 371 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AL359385.1-201ENST00000456509 365 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 SNORA84-201ENST00000459229 133 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AC010618.1-201ENST00000469924 477 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AC116353.2-201ENST00000505332 712 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.43□□□□□ -1.38
GRIN3BO60391 IGHV3-32-201ENST00000519182 355 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.43□□□□□ -1.38
GRIN3BO60391 AC138832.1-201ENST00000522871 556 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 OR4A43P-201ENST00000532938 908 ntBASIC6.43□□□□□ -1.38
GRIN3BO60391 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms